Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AC007225.1-201ENST00000566331 1836 ntBASIC23.05■■□□□ 1.28
CYP3A4P08684 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CYP3A4P08684 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.05■■□□□ 1.28
CYP3A4P08684 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CYP3A4P08684 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.05■■□□□ 1.28
CYP3A4P08684 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CYP3A4P08684 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP3A4P08684 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CYP3A4P08684 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP3A4P08684 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CYP3A4P08684 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CYP3A4P08684 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.05■■□□□ 1.28
CYP3A4P08684 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.05■■□□□ 1.28
CYP3A4P08684 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP3A4P08684 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP3A4P08684 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP3A4P08684 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.05■■□□□ 1.28
CYP3A4P08684 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.05■■□□□ 1.28
CYP3A4P08684 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
CYP3A4P08684 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP3A4P08684 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CYP3A4P08684 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP3A4P08684 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.05■■□□□ 1.28
CYP3A4P08684 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.04■■□□□ 1.28
CYP3A4P08684 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CYP3A4P08684 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CYP3A4P08684 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.04■■□□□ 1.28
CYP3A4P08684 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CYP3A4P08684 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CYP3A4P08684 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CYP3A4P08684 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.04■■□□□ 1.28
CYP3A4P08684 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CYP3A4P08684 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
CYP3A4P08684 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.04■■□□□ 1.28
CYP3A4P08684 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.04■■□□□ 1.28
CYP3A4P08684 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CYP3A4P08684 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.04■■□□□ 1.28
CYP3A4P08684 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.04■■□□□ 1.28
CYP3A4P08684 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CYP3A4P08684 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.03■■□□□ 1.28
CYP3A4P08684 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CYP3A4P08684 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.03■■□□□ 1.28
CYP3A4P08684 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.03■■□□□ 1.28
CYP3A4P08684 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CYP3A4P08684 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.03■■□□□ 1.28
CYP3A4P08684 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.03■■□□□ 1.28
CYP3A4P08684 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.03■■□□□ 1.28
CYP3A4P08684 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CYP3A4P08684 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CYP3A4P08684 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.03■■□□□ 1.28
CYP3A4P08684 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.03■■□□□ 1.28
CYP3A4P08684 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.03■■□□□ 1.28
CYP3A4P08684 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CYP3A4P08684 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CYP3A4P08684 AL137060.1-201ENST00000618151 2648 ntBASIC23.03■■□□□ 1.28
CYP3A4P08684 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CYP3A4P08684 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.02■■□□□ 1.28
CYP3A4P08684 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.02■■□□□ 1.28
CYP3A4P08684 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CYP3A4P08684 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP3A4P08684 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.02■■□□□ 1.28
CYP3A4P08684 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CYP3A4P08684 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP3A4P08684 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.02■■□□□ 1.28
CYP3A4P08684 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP3A4P08684 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.02■■□□□ 1.28
CYP3A4P08684 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.02■■□□□ 1.28
CYP3A4P08684 RNA5SP413-201ENST00000516373 109 ntBASIC23.02■■□□□ 1.28
CYP3A4P08684 AC060766.5-201ENST00000590539 871 ntBASIC23.02■■□□□ 1.28
CYP3A4P08684 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP3A4P08684 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP3A4P08684 FP700111.2-201ENST00000619190 1892 ntBASIC23.02■■□□□ 1.28
CYP3A4P08684 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP3A4P08684 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CYP3A4P08684 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.01■■□□□ 1.27
CYP3A4P08684 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.01■■□□□ 1.27
CYP3A4P08684 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CYP3A4P08684 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CYP3A4P08684 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CYP3A4P08684 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.01■■□□□ 1.27
CYP3A4P08684 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.01■■□□□ 1.27
CYP3A4P08684 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.01■■□□□ 1.27
CYP3A4P08684 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CYP3A4P08684 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CYP3A4P08684 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
CYP3A4P08684 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.01■■□□□ 1.27
CYP3A4P08684 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CYP3A4P08684 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.01■■□□□ 1.27
CYP3A4P08684 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23■■□□□ 1.27
CYP3A4P08684 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CYP3A4P08684 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23■■□□□ 1.27
CYP3A4P08684 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CYP3A4P08684 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CYP3A4P08684 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
CYP3A4P08684 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23■■□□□ 1.27
CYP3A4P08684 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CYP3A4P08684 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CYP3A4P08684 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23■■□□□ 1.27
CYP3A4P08684 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23■■□□□ 1.27
CYP3A4P08684 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms