Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ALDH1A1P00352 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.54■■□□□ 1.36
ALDH1A1P00352 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.54■■□□□ 1.36
ALDH1A1P00352 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.54■■□□□ 1.36
ALDH1A1P00352 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.53■■□□□ 1.36
ALDH1A1P00352 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
ALDH1A1P00352 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ALDH1A1P00352 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
ALDH1A1P00352 SLC25A3P1-201ENST00000443844 931 ntBASIC23.53■■□□□ 1.36
ALDH1A1P00352 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.53■■□□□ 1.36
ALDH1A1P00352 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ALDH1A1P00352 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.53■■□□□ 1.36
ALDH1A1P00352 AC093323.1-202ENST00000635031 2045 ntBASIC23.53■■□□□ 1.36
ALDH1A1P00352 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ALDH1A1P00352 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ALDH1A1P00352 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
ALDH1A1P00352 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.52■■□□□ 1.36
ALDH1A1P00352 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ALDH1A1P00352 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ALDH1A1P00352 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
ALDH1A1P00352 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
ALDH1A1P00352 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ALDH1A1P00352 AP002982.1-201ENST00000492365 877 ntBASIC23.52■■□□□ 1.36
ALDH1A1P00352 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.52■■□□□ 1.36
ALDH1A1P00352 FITM1-202ENST00000559294 800 ntBASIC23.52■■□□□ 1.36
ALDH1A1P00352 RBM42-202ENST00000586618 771 ntTSL 3 BASIC23.52■■□□□ 1.36
ALDH1A1P00352 AC004264.1-201ENST00000608354 794 ntBASIC23.52■■□□□ 1.36
ALDH1A1P00352 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
ALDH1A1P00352 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.52■■□□□ 1.36
ALDH1A1P00352 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.52■■□□□ 1.36
ALDH1A1P00352 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ALDH1A1P00352 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
ALDH1A1P00352 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ALDH1A1P00352 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ALDH1A1P00352 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ALDH1A1P00352 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.51■■□□□ 1.35
ALDH1A1P00352 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ALDH1A1P00352 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
ALDH1A1P00352 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
ALDH1A1P00352 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ALDH1A1P00352 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ALDH1A1P00352 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.51■■□□□ 1.35
ALDH1A1P00352 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
ALDH1A1P00352 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
ALDH1A1P00352 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ALDH1A1P00352 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
ALDH1A1P00352 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
ALDH1A1P00352 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ALDH1A1P00352 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ALDH1A1P00352 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
ALDH1A1P00352 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ALDH1A1P00352 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.5■■□□□ 1.35
ALDH1A1P00352 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC23.5■■□□□ 1.35
ALDH1A1P00352 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.5■■□□□ 1.35
ALDH1A1P00352 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.5■■□□□ 1.35
ALDH1A1P00352 AC010542.4-201ENST00000563151 1910 ntBASIC23.5■■□□□ 1.35
ALDH1A1P00352 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
ALDH1A1P00352 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
ALDH1A1P00352 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ALDH1A1P00352 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ALDH1A1P00352 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
ALDH1A1P00352 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ALDH1A1P00352 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
ALDH1A1P00352 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ALDH1A1P00352 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ALDH1A1P00352 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ALDH1A1P00352 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ALDH1A1P00352 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.49■■□□□ 1.35
ALDH1A1P00352 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
ALDH1A1P00352 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
ALDH1A1P00352 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
ALDH1A1P00352 AC104076.2-201ENST00000448912 469 ntBASIC23.49■■□□□ 1.35
ALDH1A1P00352 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.49■■□□□ 1.35
ALDH1A1P00352 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.49■■□□□ 1.35
ALDH1A1P00352 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
ALDH1A1P00352 AC010947.1-201ENST00000623454 693 ntBASIC23.49■■□□□ 1.35
ALDH1A1P00352 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ALDH1A1P00352 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.49■■□□□ 1.35
ALDH1A1P00352 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
ALDH1A1P00352 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
ALDH1A1P00352 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ALDH1A1P00352 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ALDH1A1P00352 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
ALDH1A1P00352 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
ALDH1A1P00352 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.48■■□□□ 1.35
ALDH1A1P00352 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
ALDH1A1P00352 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
ALDH1A1P00352 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.48■■□□□ 1.35
ALDH1A1P00352 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.48■■□□□ 1.35
ALDH1A1P00352 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ALDH1A1P00352 AC026471.6-201ENST00000622954 1905 ntBASIC23.48■■□□□ 1.35
ALDH1A1P00352 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.48■■□□□ 1.35
ALDH1A1P00352 CYP2D8P-201ENST00000433633 1490 ntBASIC23.48■■□□□ 1.35
ALDH1A1P00352 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
ALDH1A1P00352 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
ALDH1A1P00352 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ALDH1A1P00352 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ALDH1A1P00352 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ALDH1A1P00352 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.47■■□□□ 1.35
ALDH1A1P00352 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms