Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB2O95900 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.42■■□□□ 1.02
TRUB2O95900 AC092667.1-201ENST00000434301 2586 ntBASIC21.42■■□□□ 1.02
TRUB2O95900 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB2O95900 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB2O95900 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.42■■□□□ 1.02
TRUB2O95900 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.42■■□□□ 1.02
TRUB2O95900 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB2O95900 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB2O95900 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
TRUB2O95900 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TRUB2O95900 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB2O95900 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRUB2O95900 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRUB2O95900 GABARAPL3-202ENST00000624044 1851 ntBASIC21.41■■□□□ 1.02
TRUB2O95900 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.41■■□□□ 1.02
TRUB2O95900 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TRUB2O95900 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRUB2O95900 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.41■■□□□ 1.02
TRUB2O95900 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.41■■□□□ 1.02
TRUB2O95900 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TRUB2O95900 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.4■■□□□ 1.02
TRUB2O95900 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB2O95900 AC010980.2-201ENST00000587099 1412 ntBASIC21.4■■□□□ 1.02
TRUB2O95900 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB2O95900 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB2O95900 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.4■■□□□ 1.02
TRUB2O95900 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB2O95900 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TRUB2O95900 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.4■■□□□ 1.02
TRUB2O95900 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.4■■□□□ 1.02
TRUB2O95900 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.4■■□□□ 1.02
TRUB2O95900 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB2O95900 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB2O95900 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.4■■□□□ 1.02
TRUB2O95900 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB2O95900 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB2O95900 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB2O95900 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB2O95900 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.4■■□□□ 1.02
TRUB2O95900 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.4■■□□□ 1.02
TRUB2O95900 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TRUB2O95900 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRUB2O95900 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.4■■□□□ 1.02
TRUB2O95900 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.02
TRUB2O95900 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRUB2O95900 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRUB2O95900 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.39■■□□□ 1.02
TRUB2O95900 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRUB2O95900 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.39■■□□□ 1.02
TRUB2O95900 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRUB2O95900 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
TRUB2O95900 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRUB2O95900 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TRUB2O95900 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRUB2O95900 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRUB2O95900 ID1-201ENST00000376105 1233 ntBASIC21.39■■□□□ 1.01
TRUB2O95900 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRUB2O95900 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TRUB2O95900 GUSBP6-202ENST00000438529 1198 ntBASIC21.39■■□□□ 1.01
TRUB2O95900 TSPY6P-201ENST00000448518 926 ntBASIC21.39■■□□□ 1.01
TRUB2O95900 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRUB2O95900 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.39■■□□□ 1.01
TRUB2O95900 AC100791.3-201ENST00000617619 330 ntBASIC21.39■■□□□ 1.01
TRUB2O95900 AL109923.1-201ENST00000618799 583 ntBASIC21.39■■□□□ 1.01
TRUB2O95900 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRUB2O95900 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
TRUB2O95900 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRUB2O95900 MKRN4P-201ENST00000444706 1521 ntBASIC21.39■■□□□ 1.01
TRUB2O95900 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRUB2O95900 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRUB2O95900 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRUB2O95900 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.38■■□□□ 1.01
TRUB2O95900 AL121603.2-201ENST00000557373 2117 ntBASIC21.38■■□□□ 1.01
TRUB2O95900 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.38■■□□□ 1.01
TRUB2O95900 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRUB2O95900 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRUB2O95900 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TRUB2O95900 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRUB2O95900 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.38■■□□□ 1.01
TRUB2O95900 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRUB2O95900 HLA-L-209ENST00000420110 1011 ntBASIC21.38■■□□□ 1.01
TRUB2O95900 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.38■■□□□ 1.01
TRUB2O95900 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.38■■□□□ 1.01
TRUB2O95900 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.38■■□□□ 1.01
TRUB2O95900 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TRUB2O95900 AC104771.1-201ENST00000603335 964 ntBASIC21.38■■□□□ 1.01
TRUB2O95900 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.38■■□□□ 1.01
TRUB2O95900 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.38■■□□□ 1.01
TRUB2O95900 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRUB2O95900 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
TRUB2O95900 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRUB2O95900 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRUB2O95900 CYP21A1P-202ENST00000354927 1481 ntBASIC21.38■■□□□ 1.01
TRUB2O95900 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRUB2O95900 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
TRUB2O95900 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRUB2O95900 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRUB2O95900 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.37■■□□□ 1.01
TRUB2O95900 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms