Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.99■■□□□ 1.27
GGPS1O95749 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
GGPS1O95749 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
GGPS1O95749 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.99■■□□□ 1.27
GGPS1O95749 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
GGPS1O95749 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
GGPS1O95749 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.99■■□□□ 1.27
GGPS1O95749 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.99■■□□□ 1.27
GGPS1O95749 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
GGPS1O95749 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.98■■□□□ 1.27
GGPS1O95749 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
GGPS1O95749 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
GGPS1O95749 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
GGPS1O95749 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
GGPS1O95749 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.98■■□□□ 1.27
GGPS1O95749 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.98■■□□□ 1.27
GGPS1O95749 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
GGPS1O95749 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.98■■□□□ 1.27
GGPS1O95749 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
GGPS1O95749 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
GGPS1O95749 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
GGPS1O95749 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
GGPS1O95749 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
GGPS1O95749 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
GGPS1O95749 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.97■■□□□ 1.27
GGPS1O95749 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.97■■□□□ 1.27
GGPS1O95749 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
GGPS1O95749 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.97■■□□□ 1.27
GGPS1O95749 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.97■■□□□ 1.27
GGPS1O95749 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
GGPS1O95749 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
GGPS1O95749 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
GGPS1O95749 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.97■■□□□ 1.27
GGPS1O95749 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
GGPS1O95749 AC011484.1-201ENST00000377652 1995 ntBASIC22.97■■□□□ 1.27
GGPS1O95749 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
GGPS1O95749 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
GGPS1O95749 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
GGPS1O95749 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
GGPS1O95749 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
GGPS1O95749 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
GGPS1O95749 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
GGPS1O95749 KRT17P3-201ENST00000420566 1262 ntBASIC22.96■■□□□ 1.27
GGPS1O95749 AC233263.1-201ENST00000578059 224 ntBASIC22.96■■□□□ 1.27
GGPS1O95749 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.96■■□□□ 1.27
GGPS1O95749 AP006294.2-201ENST00000641667 209 ntBASIC22.96■■□□□ 1.27
GGPS1O95749 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.96■■□□□ 1.27
GGPS1O95749 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
GGPS1O95749 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.96■■□□□ 1.27
GGPS1O95749 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
GGPS1O95749 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.95■■□□□ 1.27
GGPS1O95749 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
GGPS1O95749 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
GGPS1O95749 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.95■■□□□ 1.26
GGPS1O95749 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
GGPS1O95749 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
GGPS1O95749 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.95■■□□□ 1.26
GGPS1O95749 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.95■■□□□ 1.26
GGPS1O95749 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.95■■□□□ 1.26
GGPS1O95749 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.95■■□□□ 1.26
GGPS1O95749 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.95■■□□□ 1.26
GGPS1O95749 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.95■■□□□ 1.26
GGPS1O95749 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.95■■□□□ 1.26
GGPS1O95749 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
GGPS1O95749 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
GGPS1O95749 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
GGPS1O95749 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.94■■□□□ 1.26
GGPS1O95749 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
GGPS1O95749 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
GGPS1O95749 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
GGPS1O95749 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
GGPS1O95749 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
GGPS1O95749 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
GGPS1O95749 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
GGPS1O95749 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.94■■□□□ 1.26
GGPS1O95749 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
GGPS1O95749 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
GGPS1O95749 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
GGPS1O95749 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.94■■□□□ 1.26
GGPS1O95749 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.94■■□□□ 1.26
GGPS1O95749 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
GGPS1O95749 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.94■■□□□ 1.26
GGPS1O95749 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.94■■□□□ 1.26
GGPS1O95749 AL359736.2-201ENST00000621992 437 ntBASIC22.94■■□□□ 1.26
GGPS1O95749 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
GGPS1O95749 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
GGPS1O95749 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
GGPS1O95749 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
GGPS1O95749 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
GGPS1O95749 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
GGPS1O95749 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
GGPS1O95749 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
GGPS1O95749 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.93■■□□□ 1.26
GGPS1O95749 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
GGPS1O95749 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.93■■□□□ 1.26
GGPS1O95749 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.93■■□□□ 1.26
GGPS1O95749 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
GGPS1O95749 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.93■■□□□ 1.26
GGPS1O95749 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.93■■□□□ 1.26
GGPS1O95749 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms