Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PPP1R3DO95685 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PPP1R3DO95685 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PPP1R3DO95685 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.42■□□□□ 0.54
PPP1R3DO95685 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PPP1R3DO95685 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PPP1R3DO95685 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PPP1R3DO95685 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
PPP1R3DO95685 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PPP1R3DO95685 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PPP1R3DO95685 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.42■□□□□ 0.54
PPP1R3DO95685 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PPP1R3DO95685 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PPP1R3DO95685 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PPP1R3DO95685 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
PPP1R3DO95685 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PPP1R3DO95685 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.42■□□□□ 0.54
PPP1R3DO95685 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.42■□□□□ 0.54
PPP1R3DO95685 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.42■□□□□ 0.54
PPP1R3DO95685 AP001160.3-201ENST00000601484 763 ntBASIC18.42■□□□□ 0.54
PPP1R3DO95685 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PPP1R3DO95685 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PPP1R3DO95685 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PPP1R3DO95685 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.42■□□□□ 0.54
PPP1R3DO95685 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PPP1R3DO95685 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PPP1R3DO95685 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PPP1R3DO95685 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.41■□□□□ 0.54
PPP1R3DO95685 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PPP1R3DO95685 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
PPP1R3DO95685 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PPP1R3DO95685 AC116050.2-201ENST00000612102 1779 ntBASIC18.41■□□□□ 0.54
PPP1R3DO95685 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PPP1R3DO95685 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.41■□□□□ 0.54
PPP1R3DO95685 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.41■□□□□ 0.54
PPP1R3DO95685 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PPP1R3DO95685 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.41■□□□□ 0.54
PPP1R3DO95685 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PPP1R3DO95685 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.41■□□□□ 0.54
PPP1R3DO95685 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.41■□□□□ 0.54
PPP1R3DO95685 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.41■□□□□ 0.54
PPP1R3DO95685 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.41■□□□□ 0.54
PPP1R3DO95685 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.41■□□□□ 0.54
PPP1R3DO95685 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PPP1R3DO95685 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PPP1R3DO95685 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PPP1R3DO95685 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PPP1R3DO95685 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PPP1R3DO95685 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PPP1R3DO95685 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PPP1R3DO95685 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.4■□□□□ 0.54
PPP1R3DO95685 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PPP1R3DO95685 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP1R3DO95685 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.4■□□□□ 0.54
PPP1R3DO95685 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP1R3DO95685 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP1R3DO95685 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.4■□□□□ 0.54
PPP1R3DO95685 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PPP1R3DO95685 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PPP1R3DO95685 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP1R3DO95685 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PPP1R3DO95685 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PPP1R3DO95685 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.4■□□□□ 0.54
PPP1R3DO95685 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PPP1R3DO95685 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.4■□□□□ 0.54
PPP1R3DO95685 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PPP1R3DO95685 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PPP1R3DO95685 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PPP1R3DO95685 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.39■□□□□ 0.53
PPP1R3DO95685 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PPP1R3DO95685 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP1R3DO95685 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PPP1R3DO95685 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.39■□□□□ 0.53
PPP1R3DO95685 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.39■□□□□ 0.53
PPP1R3DO95685 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.39■□□□□ 0.53
PPP1R3DO95685 MIR2861-201ENST00000636310 90 ntBASIC18.39■□□□□ 0.53
PPP1R3DO95685 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PPP1R3DO95685 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PPP1R3DO95685 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PPP1R3DO95685 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PPP1R3DO95685 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PPP1R3DO95685 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
PPP1R3DO95685 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PPP1R3DO95685 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP1R3DO95685 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.38■□□□□ 0.53
PPP1R3DO95685 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
PPP1R3DO95685 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.38■□□□□ 0.53
PPP1R3DO95685 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.38■□□□□ 0.53
PPP1R3DO95685 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.38■□□□□ 0.53
PPP1R3DO95685 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PPP1R3DO95685 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.38■□□□□ 0.53
PPP1R3DO95685 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPP1R3DO95685 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPP1R3DO95685 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPP1R3DO95685 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPP1R3DO95685 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPP1R3DO95685 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PPP1R3DO95685 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPP1R3DO95685 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PPP1R3DO95685 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms