Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIX6O95475 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SIX6O95475 LTB4R2-202ENST00000528054 3092 ntBASIC17.08■□□□□ 0.32
SIX6O95475 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
SIX6O95475 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SIX6O95475 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.08■□□□□ 0.32
SIX6O95475 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SIX6O95475 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIX6O95475 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.08■□□□□ 0.32
SIX6O95475 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIX6O95475 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIX6O95475 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SIX6O95475 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.07■□□□□ 0.32
SIX6O95475 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.07■□□□□ 0.32
SIX6O95475 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.07■□□□□ 0.32
SIX6O95475 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.07■□□□□ 0.32
SIX6O95475 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.07■□□□□ 0.32
SIX6O95475 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.07■□□□□ 0.32
SIX6O95475 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.07■□□□□ 0.32
SIX6O95475 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.07■□□□□ 0.32
SIX6O95475 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SIX6O95475 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SIX6O95475 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.07■□□□□ 0.32
SIX6O95475 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SIX6O95475 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIX6O95475 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.07■□□□□ 0.32
SIX6O95475 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SIX6O95475 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.06■□□□□ 0.32
SIX6O95475 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.06■□□□□ 0.32
SIX6O95475 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.06■□□□□ 0.32
SIX6O95475 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.06■□□□□ 0.32
SIX6O95475 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 Z92544.1-202ENST00000571933 1220 ntBASIC17.06■□□□□ 0.32
SIX6O95475 AC010980.1-201ENST00000587192 1142 ntBASIC17.06■□□□□ 0.32
SIX6O95475 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.06■□□□□ 0.32
SIX6O95475 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SIX6O95475 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 AC133637.1-201ENST00000624115 1537 ntBASIC17.06■□□□□ 0.32
SIX6O95475 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX6O95475 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 AC005332.8-201ENST00000622750 2735 ntBASIC17.05■□□□□ 0.32
SIX6O95475 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.05■□□□□ 0.32
SIX6O95475 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.05■□□□□ 0.32
SIX6O95475 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.05■□□□□ 0.32
SIX6O95475 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SIX6O95475 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.05■□□□□ 0.32
SIX6O95475 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.05■□□□□ 0.32
SIX6O95475 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SIX6O95475 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.05■□□□□ 0.32
SIX6O95475 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SIX6O95475 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms