Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
KDM4BO94953 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
KDM4BO94953 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
KDM4BO94953 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
KDM4BO94953 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
KDM4BO94953 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
KDM4BO94953 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.87■□□□□ 0.45
KDM4BO94953 AC121338.2-201ENST00000622535 1744 ntBASIC17.86■□□□□ 0.45
KDM4BO94953 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KDM4BO94953 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KDM4BO94953 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.86■□□□□ 0.45
KDM4BO94953 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KDM4BO94953 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
KDM4BO94953 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.86■□□□□ 0.45
KDM4BO94953 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.86■□□□□ 0.45
KDM4BO94953 AL136967.2-201ENST00000623968 743 ntBASIC17.86■□□□□ 0.45
KDM4BO94953 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.86■□□□□ 0.45
KDM4BO94953 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KDM4BO94953 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KDM4BO94953 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KDM4BO94953 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
KDM4BO94953 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
KDM4BO94953 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
KDM4BO94953 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
KDM4BO94953 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.86■□□□□ 0.45
KDM4BO94953 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KDM4BO94953 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KDM4BO94953 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KDM4BO94953 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KDM4BO94953 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KDM4BO94953 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KDM4BO94953 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.85■□□□□ 0.45
KDM4BO94953 AC007225.1-201ENST00000566331 1836 ntBASIC17.85■□□□□ 0.45
KDM4BO94953 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
KDM4BO94953 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
KDM4BO94953 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KDM4BO94953 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KDM4BO94953 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
KDM4BO94953 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KDM4BO94953 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.84■□□□□ 0.45
KDM4BO94953 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.84■□□□□ 0.45
KDM4BO94953 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.84■□□□□ 0.45
KDM4BO94953 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
KDM4BO94953 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDM4BO94953 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
KDM4BO94953 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KDM4BO94953 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.84■□□□□ 0.45
KDM4BO94953 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
KDM4BO94953 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDM4BO94953 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.84■□□□□ 0.45
KDM4BO94953 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.84■□□□□ 0.45
KDM4BO94953 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
KDM4BO94953 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.84■□□□□ 0.45
KDM4BO94953 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
KDM4BO94953 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDM4BO94953 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDM4BO94953 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KDM4BO94953 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDM4BO94953 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDM4BO94953 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.83■□□□□ 0.45
KDM4BO94953 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
KDM4BO94953 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
KDM4BO94953 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.83■□□□□ 0.45
KDM4BO94953 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
KDM4BO94953 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
KDM4BO94953 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
KDM4BO94953 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
KDM4BO94953 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
KDM4BO94953 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KDM4BO94953 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM4BO94953 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM4BO94953 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.83■□□□□ 0.44
KDM4BO94953 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.83■□□□□ 0.44
KDM4BO94953 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KDM4BO94953 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KDM4BO94953 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.83■□□□□ 0.44
KDM4BO94953 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM4BO94953 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM4BO94953 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM4BO94953 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
KDM4BO94953 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM4BO94953 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM4BO94953 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KDM4BO94953 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDM4BO94953 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.82■□□□□ 0.44
KDM4BO94953 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
KDM4BO94953 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KDM4BO94953 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.82■□□□□ 0.44
KDM4BO94953 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.82■□□□□ 0.44
KDM4BO94953 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.82■□□□□ 0.44
KDM4BO94953 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KDM4BO94953 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.82■□□□□ 0.44
KDM4BO94953 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM4BO94953 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
KDM4BO94953 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KDM4BO94953 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM4BO94953 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM4BO94953 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDM4BO94953 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.82■□□□□ 0.44
KDM4BO94953 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms