Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
LTN1O94822 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
LTN1O94822 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LTN1O94822 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
LTN1O94822 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC27.33■■□□□ 1.97
LTN1O94822 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC27.33■■□□□ 1.97
LTN1O94822 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC27.33■■□□□ 1.97
LTN1O94822 GRAP-204ENST00000573099 846 ntTSL 3 BASIC27.33■■□□□ 1.97
LTN1O94822 PARN-205ENST00000539279 1557 ntTSL 2 BASIC27.33■■□□□ 1.97
LTN1O94822 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LTN1O94822 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC27.33■■□□□ 1.97
LTN1O94822 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
LTN1O94822 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC27.33■■□□□ 1.97
LTN1O94822 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LTN1O94822 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LTN1O94822 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC27.33■■□□□ 1.97
LTN1O94822 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
LTN1O94822 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
LTN1O94822 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC27.32■■□□□ 1.96
LTN1O94822 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC27.32■■□□□ 1.96
LTN1O94822 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
LTN1O94822 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LTN1O94822 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC27.32■■□□□ 1.96
LTN1O94822 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
LTN1O94822 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LTN1O94822 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
LTN1O94822 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC27.32■■□□□ 1.96
LTN1O94822 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC27.32■■□□□ 1.96
LTN1O94822 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LTN1O94822 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC27.32■■□□□ 1.96
LTN1O94822 RARRES2P10-201ENST00000564312 460 ntBASIC27.32■■□□□ 1.96
LTN1O94822 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC27.32■■□□□ 1.96
LTN1O94822 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC27.32■■□□□ 1.96
LTN1O94822 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
LTN1O94822 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LTN1O94822 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
LTN1O94822 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC27.31■■□□□ 1.96
LTN1O94822 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
LTN1O94822 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
LTN1O94822 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
LTN1O94822 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LTN1O94822 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LTN1O94822 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
LTN1O94822 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
LTN1O94822 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
LTN1O94822 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LTN1O94822 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LTN1O94822 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
LTN1O94822 TUB-203ENST00000534099 1759 ntTSL 2 BASIC27.31■■□□□ 1.96
LTN1O94822 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTN1O94822 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC27.3■■□□□ 1.96
LTN1O94822 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC27.3■■□□□ 1.96
LTN1O94822 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC27.3■■□□□ 1.96
LTN1O94822 THEM4-205ENST00000489410 643 ntTSL 2 BASIC27.3■■□□□ 1.96
LTN1O94822 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC27.3■■□□□ 1.96
LTN1O94822 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTN1O94822 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.3■■□□□ 1.96
LTN1O94822 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTN1O94822 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
LTN1O94822 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTN1O94822 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTN1O94822 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
LTN1O94822 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC27.3■■□□□ 1.96
LTN1O94822 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTN1O94822 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
LTN1O94822 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTN1O94822 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC27.3■■□□□ 1.96
LTN1O94822 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC27.3■■□□□ 1.96
LTN1O94822 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTN1O94822 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
LTN1O94822 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
LTN1O94822 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LTN1O94822 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC27.29■■□□□ 1.96
LTN1O94822 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
LTN1O94822 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
LTN1O94822 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
LTN1O94822 AL390719.1-204ENST00000412397 1219 ntBASIC27.29■■□□□ 1.96
LTN1O94822 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
LTN1O94822 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
LTN1O94822 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC27.29■■□□□ 1.96
LTN1O94822 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC27.29■■□□□ 1.96
LTN1O94822 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
LTN1O94822 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
LTN1O94822 AC124283.5-201ENST00000624661 1809 ntBASIC27.28■■□□□ 1.96
LTN1O94822 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LTN1O94822 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC27.28■■□□□ 1.96
LTN1O94822 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LTN1O94822 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC27.28■■□□□ 1.96
LTN1O94822 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
LTN1O94822 TREX2-204ENST00000370212 861 ntTSL 5 BASIC27.28■■□□□ 1.96
LTN1O94822 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
LTN1O94822 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC27.28■■□□□ 1.96
LTN1O94822 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
LTN1O94822 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC27.28■■□□□ 1.96
LTN1O94822 MIR4785-201ENST00000585005 73 ntBASIC27.28■■□□□ 1.96
LTN1O94822 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC27.28■■□□□ 1.96
LTN1O94822 CABP2-204ENST00000636477 941 ntTSL 5 BASIC27.28■■□□□ 1.96
LTN1O94822 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
LTN1O94822 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC27.28■■□□□ 1.96
LTN1O94822 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms