Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC4O75487 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GPC4O75487 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GPC4O75487 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
GPC4O75487 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
GPC4O75487 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC4O75487 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.39■□□□□ 0.85
GPC4O75487 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC4O75487 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GPC4O75487 AC245052.3-201ENST00000450182 901 ntBASIC20.39■□□□□ 0.85
GPC4O75487 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
GPC4O75487 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.39■□□□□ 0.85
GPC4O75487 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC4O75487 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.39■□□□□ 0.85
GPC4O75487 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.39■□□□□ 0.85
GPC4O75487 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC4O75487 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GPC4O75487 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
GPC4O75487 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
GPC4O75487 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GPC4O75487 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC4O75487 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC4O75487 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GPC4O75487 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.38■□□□□ 0.85
GPC4O75487 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.38■□□□□ 0.85
GPC4O75487 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC4O75487 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GPC4O75487 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC4O75487 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GPC4O75487 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.38■□□□□ 0.85
GPC4O75487 AC092437.1-201ENST00000624794 1048 ntBASIC20.38■□□□□ 0.85
GPC4O75487 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.38■□□□□ 0.85
GPC4O75487 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC4O75487 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC4O75487 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
GPC4O75487 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GPC4O75487 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.38■□□□□ 0.85
GPC4O75487 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC4O75487 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC4O75487 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
GPC4O75487 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GPC4O75487 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC4O75487 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC4O75487 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GPC4O75487 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GPC4O75487 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
GPC4O75487 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC4O75487 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.37■□□□□ 0.85
GPC4O75487 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC4O75487 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC4O75487 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GPC4O75487 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GPC4O75487 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.37■□□□□ 0.85
GPC4O75487 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.37■□□□□ 0.85
GPC4O75487 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.37■□□□□ 0.85
GPC4O75487 AL121603.2-201ENST00000557373 2117 ntBASIC20.37■□□□□ 0.85
GPC4O75487 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.37■□□□□ 0.85
GPC4O75487 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.37■□□□□ 0.85
GPC4O75487 MFSD11-216ENST00000590393 1141 ntBASIC20.37■□□□□ 0.85
GPC4O75487 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.37■□□□□ 0.85
GPC4O75487 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GPC4O75487 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC4O75487 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC4O75487 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
GPC4O75487 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GPC4O75487 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.36■□□□□ 0.85
GPC4O75487 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GPC4O75487 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GPC4O75487 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
GPC4O75487 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GPC4O75487 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
GPC4O75487 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
GPC4O75487 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.36■□□□□ 0.85
GPC4O75487 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.36■□□□□ 0.85
GPC4O75487 AC010536.3-201ENST00000620306 533 ntBASIC20.36■□□□□ 0.85
GPC4O75487 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GPC4O75487 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GPC4O75487 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
GPC4O75487 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
GPC4O75487 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GPC4O75487 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GPC4O75487 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GPC4O75487 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GPC4O75487 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GPC4O75487 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.35■□□□□ 0.85
GPC4O75487 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.35■□□□□ 0.85
GPC4O75487 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.35■□□□□ 0.85
GPC4O75487 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.35■□□□□ 0.85
GPC4O75487 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GPC4O75487 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GPC4O75487 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.35■□□□□ 0.85
GPC4O75487 IKBKGP1-201ENST00000612193 1073 ntBASIC20.35■□□□□ 0.85
GPC4O75487 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GPC4O75487 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GPC4O75487 AC006128.1-201ENST00000624704 1661 ntBASIC20.35■□□□□ 0.85
GPC4O75487 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.35■□□□□ 0.85
GPC4O75487 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.35■□□□□ 0.85
GPC4O75487 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.34■□□□□ 0.85
GPC4O75487 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GPC4O75487 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms