Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN2BO60939 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.36■□□□□ 0.69
SCN2BO60939 AC092720.2-201ENST00000602388 1665 ntBASIC19.36■□□□□ 0.69
SCN2BO60939 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN2BO60939 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SCN2BO60939 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN2BO60939 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SCN2BO60939 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN2BO60939 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.35■□□□□ 0.69
SCN2BO60939 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN2BO60939 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN2BO60939 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN2BO60939 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN2BO60939 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN2BO60939 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN2BO60939 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN2BO60939 CCDC92B-201ENST00000575506 885 ntBASIC19.35■□□□□ 0.69
SCN2BO60939 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN2BO60939 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN2BO60939 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN2BO60939 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN2BO60939 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SCN2BO60939 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN2BO60939 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN2BO60939 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN2BO60939 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN2BO60939 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN2BO60939 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN2BO60939 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN2BO60939 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN2BO60939 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SCN2BO60939 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN2BO60939 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN2BO60939 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SCN2BO60939 AC091799.1-201ENST00000422823 811 ntBASIC19.34■□□□□ 0.69
SCN2BO60939 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.34■□□□□ 0.69
SCN2BO60939 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.34■□□□□ 0.69
SCN2BO60939 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.34■□□□□ 0.69
SCN2BO60939 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.34■□□□□ 0.69
SCN2BO60939 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.34■□□□□ 0.69
SCN2BO60939 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN2BO60939 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN2BO60939 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN2BO60939 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN2BO60939 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN2BO60939 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN2BO60939 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN2BO60939 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN2BO60939 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SCN2BO60939 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.33■□□□□ 0.68
SCN2BO60939 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.33■□□□□ 0.68
SCN2BO60939 AC243732.1-201ENST00000612648 864 ntBASIC19.33■□□□□ 0.68
SCN2BO60939 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.33■□□□□ 0.68
SCN2BO60939 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN2BO60939 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.33■□□□□ 0.68
SCN2BO60939 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCN2BO60939 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN2BO60939 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SCN2BO60939 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN2BO60939 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.33■□□□□ 0.68
SCN2BO60939 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.33■□□□□ 0.68
SCN2BO60939 AC004854.2-201ENST00000608450 1441 ntBASIC19.33■□□□□ 0.68
SCN2BO60939 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCN2BO60939 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.32■□□□□ 0.68
SCN2BO60939 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN2BO60939 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN2BO60939 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.32■□□□□ 0.68
SCN2BO60939 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.32■□□□□ 0.68
SCN2BO60939 KRT18P14-201ENST00000534205 1250 ntBASIC19.32■□□□□ 0.68
SCN2BO60939 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.32■□□□□ 0.68
SCN2BO60939 SLC7A5P1-201ENST00000568957 537 ntBASIC19.32■□□□□ 0.68
SCN2BO60939 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.32■□□□□ 0.68
SCN2BO60939 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN2BO60939 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.32■□□□□ 0.68
SCN2BO60939 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SCN2BO60939 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SCN2BO60939 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN2BO60939 AIRN-201ENST00000601203 4374 ntBASIC19.32■□□□□ 0.68
SCN2BO60939 RBM17P2-201ENST00000616397 1405 ntBASIC19.32■□□□□ 0.68
SCN2BO60939 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCN2BO60939 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN2BO60939 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.32■□□□□ 0.68
SCN2BO60939 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCN2BO60939 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN2BO60939 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN2BO60939 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN2BO60939 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN2BO60939 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN2BO60939 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN2BO60939 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SCN2BO60939 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN2BO60939 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN2BO60939 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SCN2BO60939 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN2BO60939 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.31■□□□□ 0.68
SCN2BO60939 KRT18P61-201ENST00000585825 1298 ntBASIC19.31■□□□□ 0.68
SCN2BO60939 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.31■□□□□ 0.68
SCN2BO60939 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN2BO60939 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
SCN2BO60939 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms