Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
BRD4O60885 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
BRD4O60885 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
BRD4O60885 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
BRD4O60885 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
BRD4O60885 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
BRD4O60885 NXN-202ENST00000537628 1340 ntTSL 3 BASIC28.33■■■□□ 2.13
BRD4O60885 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC28.33■■■□□ 2.13
BRD4O60885 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
BRD4O60885 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC28.33■■■□□ 2.13
BRD4O60885 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC28.33■■■□□ 2.13
BRD4O60885 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
BRD4O60885 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
BRD4O60885 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC28.33■■■□□ 2.13
BRD4O60885 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
BRD4O60885 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
BRD4O60885 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
BRD4O60885 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC28.32■■■□□ 2.12
BRD4O60885 PALM-207ENST00000590161 2137 ntTSL 4 BASIC28.32■■■□□ 2.12
BRD4O60885 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
BRD4O60885 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
BRD4O60885 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
BRD4O60885 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
BRD4O60885 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
BRD4O60885 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
BRD4O60885 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
BRD4O60885 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC28.32■■■□□ 2.12
BRD4O60885 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC28.32■■■□□ 2.12
BRD4O60885 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC28.32■■■□□ 2.12
BRD4O60885 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
BRD4O60885 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
BRD4O60885 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
BRD4O60885 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC28.31■■■□□ 2.12
BRD4O60885 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
BRD4O60885 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
BRD4O60885 KRT17P3-201ENST00000420566 1262 ntBASIC28.31■■■□□ 2.12
BRD4O60885 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC28.31■■■□□ 2.12
BRD4O60885 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
BRD4O60885 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
BRD4O60885 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
BRD4O60885 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC28.3■■■□□ 2.12
BRD4O60885 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
BRD4O60885 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC28.3■■■□□ 2.12
BRD4O60885 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC28.3■■■□□ 2.12
BRD4O60885 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
BRD4O60885 PEX7-202ENST00000367756 680 ntTSL 3 BASIC28.3■■■□□ 2.12
BRD4O60885 RPPH1-201ENST00000516869 333 ntBASIC28.3■■■□□ 2.12
BRD4O60885 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
BRD4O60885 CRK-204ENST00000574295 1391 ntTSL 5 BASIC28.3■■■□□ 2.12
BRD4O60885 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
BRD4O60885 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
BRD4O60885 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
BRD4O60885 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC28.29■■■□□ 2.12
BRD4O60885 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
BRD4O60885 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC28.29■■■□□ 2.12
BRD4O60885 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
BRD4O60885 MIR718-201ENST00000390190 70 ntBASIC28.29■■■□□ 2.12
BRD4O60885 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
BRD4O60885 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC28.29■■■□□ 2.12
BRD4O60885 OR2A1-AS1-207ENST00000486094 819 ntBASIC28.29■■■□□ 2.12
BRD4O60885 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
BRD4O60885 RN7SL471P-201ENST00000580476 299 ntBASIC28.29■■■□□ 2.12
BRD4O60885 AC069544.1-201ENST00000609399 999 ntBASIC28.29■■■□□ 2.12
BRD4O60885 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC28.29■■■□□ 2.12
BRD4O60885 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC28.29■■■□□ 2.12
BRD4O60885 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
BRD4O60885 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
BRD4O60885 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
BRD4O60885 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
BRD4O60885 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
BRD4O60885 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
BRD4O60885 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
BRD4O60885 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
BRD4O60885 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC28.28■■■□□ 2.12
BRD4O60885 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
BRD4O60885 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
BRD4O60885 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
BRD4O60885 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
BRD4O60885 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
BRD4O60885 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
BRD4O60885 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
BRD4O60885 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
BRD4O60885 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC28.28■■■□□ 2.12
BRD4O60885 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
BRD4O60885 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC28.27■■■□□ 2.12
BRD4O60885 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
BRD4O60885 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC28.27■■■□□ 2.12
BRD4O60885 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
BRD4O60885 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC28.27■■■□□ 2.12
BRD4O60885 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC28.27■■■□□ 2.12
BRD4O60885 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC28.27■■■□□ 2.12
BRD4O60885 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
BRD4O60885 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
BRD4O60885 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
BRD4O60885 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
BRD4O60885 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
BRD4O60885 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC28.27■■■□□ 2.12
BRD4O60885 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC28.27■■■□□ 2.12
BRD4O60885 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
BRD4O60885 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms