Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNAI2O43623 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.2■□□□□ 0.02
SNAI2O43623 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNAI2O43623 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.2■□□□□ 0.02
SNAI2O43623 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.2■□□□□ 0.02
SNAI2O43623 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.2■□□□□ 0.02
SNAI2O43623 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
SNAI2O43623 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.2■□□□□ 0.02
SNAI2O43623 SMUG1P1-201ENST00000590640 811 ntBASIC15.2■□□□□ 0.02
SNAI2O43623 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SNAI2O43623 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNAI2O43623 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNAI2O43623 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.2■□□□□ 0.02
SNAI2O43623 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.2■□□□□ 0.02
SNAI2O43623 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNAI2O43623 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SNAI2O43623 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNAI2O43623 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNAI2O43623 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.2■□□□□ 0.02
SNAI2O43623 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNAI2O43623 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNAI2O43623 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNAI2O43623 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SNAI2O43623 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SNAI2O43623 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
SNAI2O43623 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.19■□□□□ 0.02
SNAI2O43623 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.19■□□□□ 0.02
SNAI2O43623 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 AL162377.1-201ENST00000618844 1793 ntBASIC15.19■□□□□ 0.02
SNAI2O43623 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.19■□□□□ 0.02
SNAI2O43623 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.19■□□□□ 0.02
SNAI2O43623 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.19■□□□□ 0.02
SNAI2O43623 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SNAI2O43623 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SNAI2O43623 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.18■□□□□ 0.02
SNAI2O43623 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SNAI2O43623 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
SNAI2O43623 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.18■□□□□ 0.02
SNAI2O43623 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.18■□□□□ 0.02
SNAI2O43623 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.18■□□□□ 0.02
SNAI2O43623 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.18■□□□□ 0.02
SNAI2O43623 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.18■□□□□ 0.02
SNAI2O43623 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SNAI2O43623 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.18■□□□□ 0.02
SNAI2O43623 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SNAI2O43623 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.18■□□□□ 0.02
SNAI2O43623 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 AC120498.9-201ENST00000339021 3867 ntBASIC15.18■□□□□ 0.02
SNAI2O43623 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.18■□□□□ 0.02
SNAI2O43623 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SNAI2O43623 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SNAI2O43623 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.17■□□□□ 0.02
SNAI2O43623 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.17■□□□□ 0.02
SNAI2O43623 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SNAI2O43623 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms