Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.4■□□□□ 0.86
PFDN6O15212 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.4■□□□□ 0.86
PFDN6O15212 AC026271.2-201ENST00000428091 497 ntBASIC20.4■□□□□ 0.86
PFDN6O15212 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PFDN6O15212 TERF1P5-201ENST00000477545 1207 ntBASIC20.4■□□□□ 0.86
PFDN6O15212 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PFDN6O15212 AC010536.3-201ENST00000620306 533 ntBASIC20.4■□□□□ 0.86
PFDN6O15212 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PFDN6O15212 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PFDN6O15212 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PFDN6O15212 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.39■□□□□ 0.86
PFDN6O15212 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.39■□□□□ 0.86
PFDN6O15212 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PFDN6O15212 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
PFDN6O15212 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN6O15212 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN6O15212 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN6O15212 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN6O15212 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN6O15212 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN6O15212 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN6O15212 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.39■□□□□ 0.85
PFDN6O15212 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.39■□□□□ 0.85
PFDN6O15212 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.39■□□□□ 0.85
PFDN6O15212 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN6O15212 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.39■□□□□ 0.85
PFDN6O15212 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.39■□□□□ 0.85
PFDN6O15212 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN6O15212 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN6O15212 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN6O15212 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN6O15212 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN6O15212 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.39■□□□□ 0.85
PFDN6O15212 AC092667.1-201ENST00000434301 2586 ntBASIC20.39■□□□□ 0.85
PFDN6O15212 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.38■□□□□ 0.85
PFDN6O15212 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PFDN6O15212 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PFDN6O15212 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.38■□□□□ 0.85
PFDN6O15212 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PFDN6O15212 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
PFDN6O15212 AL591742.1-201ENST00000604433 565 ntBASIC20.38■□□□□ 0.85
PFDN6O15212 AC013268.1-206ENST00000638368 961 ntBASIC20.38■□□□□ 0.85
PFDN6O15212 AC112229.1-201ENST00000639295 961 ntBASIC20.38■□□□□ 0.85
PFDN6O15212 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.38■□□□□ 0.85
PFDN6O15212 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PFDN6O15212 GABARAPL3-202ENST00000624044 1851 ntBASIC20.38■□□□□ 0.85
PFDN6O15212 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
PFDN6O15212 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PFDN6O15212 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PFDN6O15212 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PFDN6O15212 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PFDN6O15212 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PFDN6O15212 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PFDN6O15212 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.37■□□□□ 0.85
PFDN6O15212 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN6O15212 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PFDN6O15212 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN6O15212 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.37■□□□□ 0.85
PFDN6O15212 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN6O15212 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN6O15212 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN6O15212 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PFDN6O15212 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PFDN6O15212 PGM5P4-201ENST00000421970 445 ntBASIC20.37■□□□□ 0.85
PFDN6O15212 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.37■□□□□ 0.85
PFDN6O15212 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.37■□□□□ 0.85
PFDN6O15212 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.37■□□□□ 0.85
PFDN6O15212 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN6O15212 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN6O15212 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN6O15212 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN6O15212 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN6O15212 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN6O15212 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PFDN6O15212 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN6O15212 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.36■□□□□ 0.85
PFDN6O15212 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.36■□□□□ 0.85
PFDN6O15212 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.36■□□□□ 0.85
PFDN6O15212 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN6O15212 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN6O15212 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN6O15212 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.36■□□□□ 0.85
PFDN6O15212 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PFDN6O15212 AL162412.1-201ENST00000567129 965 ntBASIC20.36■□□□□ 0.85
PFDN6O15212 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.36■□□□□ 0.85
PFDN6O15212 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.36■□□□□ 0.85
PFDN6O15212 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.36■□□□□ 0.85
PFDN6O15212 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN6O15212 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN6O15212 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN6O15212 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PFDN6O15212 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN6O15212 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.36■□□□□ 0.85
PFDN6O15212 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PFDN6O15212 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PFDN6O15212 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PFDN6O15212 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PFDN6O15212 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PFDN6O15212 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PFDN6O15212 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms