Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH17O14917 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDH17O14917 FEM1AP1-201ENST00000431297 1995 ntBASIC19.46■□□□□ 0.71
PCDH17O14917 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
PCDH17O14917 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
PCDH17O14917 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH17O14917 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDH17O14917 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH17O14917 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH17O14917 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDH17O14917 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH17O14917 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH17O14917 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH17O14917 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH17O14917 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH17O14917 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDH17O14917 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDH17O14917 AC069152.1-201ENST00000438030 544 ntBASIC19.46■□□□□ 0.71
PCDH17O14917 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH17O14917 CD99P1-205ENST00000527459 561 ntBASIC19.46■□□□□ 0.71
PCDH17O14917 AL138781.1-201ENST00000566567 1274 ntBASIC19.46■□□□□ 0.71
PCDH17O14917 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDH17O14917 TMEM191A-211ENST00000637163 1067 ntBASIC19.46■□□□□ 0.71
PCDH17O14917 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH17O14917 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH17O14917 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH17O14917 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH17O14917 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH17O14917 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDH17O14917 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH17O14917 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH17O14917 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH17O14917 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH17O14917 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH17O14917 AC091799.1-201ENST00000422823 811 ntBASIC19.45■□□□□ 0.7
PCDH17O14917 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH17O14917 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH17O14917 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PCDH17O14917 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH17O14917 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH17O14917 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PCDH17O14917 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH17O14917 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH17O14917 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDH17O14917 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH17O14917 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH17O14917 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH17O14917 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH17O14917 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH17O14917 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH17O14917 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH17O14917 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCDH17O14917 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH17O14917 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDH17O14917 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDH17O14917 AC092118.2-201ENST00000613495 667 ntBASIC19.44■□□□□ 0.7
PCDH17O14917 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH17O14917 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH17O14917 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH17O14917 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PCDH17O14917 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDH17O14917 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCDH17O14917 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.43■□□□□ 0.7
PCDH17O14917 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PCDH17O14917 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PCDH17O14917 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDH17O14917 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH17O14917 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH17O14917 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDH17O14917 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDH17O14917 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.43■□□□□ 0.7
PCDH17O14917 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDH17O14917 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH17O14917 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH17O14917 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH17O14917 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDH17O14917 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PCDH17O14917 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH17O14917 MIPEPP3-201ENST00000412105 444 ntBASIC19.42■□□□□ 0.7
PCDH17O14917 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH17O14917 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH17O14917 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDH17O14917 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH17O14917 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH17O14917 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDH17O14917 AC016405.3-201ENST00000607710 860 ntBASIC19.42■□□□□ 0.7
PCDH17O14917 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms