Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.86■□□□□ 0.77
CDX4O14627 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDX4O14627 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDX4O14627 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDX4O14627 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDX4O14627 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDX4O14627 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.85■□□□□ 0.77
CDX4O14627 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDX4O14627 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDX4O14627 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDX4O14627 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDX4O14627 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDX4O14627 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CDX4O14627 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.85■□□□□ 0.77
CDX4O14627 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.85■□□□□ 0.77
CDX4O14627 KRT18P57-201ENST00000443599 1254 ntBASIC19.85■□□□□ 0.77
CDX4O14627 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDX4O14627 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.85■□□□□ 0.77
CDX4O14627 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.85■□□□□ 0.77
CDX4O14627 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDX4O14627 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.85■□□□□ 0.77
CDX4O14627 AP000525.1-201ENST00000608286 694 ntBASIC19.85■□□□□ 0.77
CDX4O14627 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDX4O14627 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CDX4O14627 AC080038.3-201ENST00000623346 1952 ntBASIC19.84■□□□□ 0.77
CDX4O14627 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDX4O14627 LINC01568-207ENST00000641790 1380 ntBASIC19.84■□□□□ 0.77
CDX4O14627 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDX4O14627 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDX4O14627 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CDX4O14627 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDX4O14627 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDX4O14627 UNC93B2-201ENST00000285383 730 ntBASIC19.84■□□□□ 0.77
CDX4O14627 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.84■□□□□ 0.77
CDX4O14627 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.84■□□□□ 0.77
CDX4O14627 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.84■□□□□ 0.77
CDX4O14627 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.84■□□□□ 0.77
CDX4O14627 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.84■□□□□ 0.77
CDX4O14627 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.84■□□□□ 0.77
CDX4O14627 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.84■□□□□ 0.77
CDX4O14627 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.84■□□□□ 0.77
CDX4O14627 NUDT16P1-203ENST00000513809 620 ntBASIC19.84■□□□□ 0.77
CDX4O14627 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.84■□□□□ 0.77
CDX4O14627 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.84■□□□□ 0.77
CDX4O14627 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.84■□□□□ 0.77
CDX4O14627 REXO1L10P-201ENST00000615707 1290 ntBASIC19.84■□□□□ 0.77
CDX4O14627 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDX4O14627 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.84■□□□□ 0.77
CDX4O14627 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CDX4O14627 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.84■□□□□ 0.77
CDX4O14627 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.83■□□□□ 0.77
CDX4O14627 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDX4O14627 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDX4O14627 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDX4O14627 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDX4O14627 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDX4O14627 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.83■□□□□ 0.77
CDX4O14627 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDX4O14627 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.83■□□□□ 0.77
CDX4O14627 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDX4O14627 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.83■□□□□ 0.77
CDX4O14627 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDX4O14627 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CDX4O14627 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDX4O14627 NBPF21P-201ENST00000425093 1451 ntBASIC19.83■□□□□ 0.76
CDX4O14627 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDX4O14627 AC073508.3-201ENST00000619697 1419 ntBASIC19.83■□□□□ 0.76
CDX4O14627 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.83■□□□□ 0.76
CDX4O14627 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDX4O14627 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDX4O14627 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDX4O14627 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDX4O14627 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDX4O14627 TERF1P1-201ENST00000311003 1181 ntBASIC19.82■□□□□ 0.76
CDX4O14627 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDX4O14627 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDX4O14627 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDX4O14627 MIR1238-201ENST00000408483 83 ntBASIC19.82■□□□□ 0.76
CDX4O14627 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.82■□□□□ 0.76
CDX4O14627 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.82■□□□□ 0.76
CDX4O14627 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.82■□□□□ 0.76
CDX4O14627 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDX4O14627 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.82■□□□□ 0.76
CDX4O14627 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.82■□□□□ 0.76
CDX4O14627 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.82■□□□□ 0.76
CDX4O14627 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.82■□□□□ 0.76
CDX4O14627 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDX4O14627 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDX4O14627 FAM99A-202ENST00000538190 1989 ntBASIC19.82■□□□□ 0.76
CDX4O14627 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDX4O14627 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.82■□□□□ 0.76
CDX4O14627 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDX4O14627 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDX4O14627 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDX4O14627 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDX4O14627 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDX4O14627 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDX4O14627 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDX4O14627 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CDX4O14627 AL031963.3-201ENST00000606441 850 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms