Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXN3O00409 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXN3O00409 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
FOXN3O00409 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
FOXN3O00409 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.89■■□□□ 1.1
FOXN3O00409 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.89■■□□□ 1.1
FOXN3O00409 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
FOXN3O00409 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.89■■□□□ 1.09
FOXN3O00409 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXN3O00409 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
FOXN3O00409 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.89■■□□□ 1.09
FOXN3O00409 AL591742.1-201ENST00000604433 565 ntBASIC21.89■■□□□ 1.09
FOXN3O00409 AC011767.1-201ENST00000617410 1153 ntBASIC21.89■■□□□ 1.09
FOXN3O00409 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.89■■□□□ 1.09
FOXN3O00409 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
FOXN3O00409 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXN3O00409 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.88■■□□□ 1.09
FOXN3O00409 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXN3O00409 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXN3O00409 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.88■■□□□ 1.09
FOXN3O00409 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXN3O00409 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
FOXN3O00409 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXN3O00409 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.88■■□□□ 1.09
FOXN3O00409 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.88■■□□□ 1.09
FOXN3O00409 AC016769.1-201ENST00000409132 1010 ntBASIC21.88■■□□□ 1.09
FOXN3O00409 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.88■■□□□ 1.09
FOXN3O00409 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXN3O00409 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.88■■□□□ 1.09
FOXN3O00409 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
FOXN3O00409 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXN3O00409 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
FOXN3O00409 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXN3O00409 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN3O00409 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
FOXN3O00409 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN3O00409 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN3O00409 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
FOXN3O00409 DUX4L16-201ENST00000555130 1264 ntBASIC21.87■■□□□ 1.09
FOXN3O00409 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.87■■□□□ 1.09
FOXN3O00409 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.87■■□□□ 1.09
FOXN3O00409 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.87■■□□□ 1.09
FOXN3O00409 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN3O00409 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN3O00409 KRT8P36-201ENST00000489121 1440 ntBASIC21.87■■□□□ 1.09
FOXN3O00409 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN3O00409 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXN3O00409 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.87■■□□□ 1.09
FOXN3O00409 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.86■■□□□ 1.09
FOXN3O00409 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN3O00409 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN3O00409 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN3O00409 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.86■■□□□ 1.09
FOXN3O00409 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.86■■□□□ 1.09
FOXN3O00409 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.86■■□□□ 1.09
FOXN3O00409 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FOXN3O00409 AC016405.3-201ENST00000607710 860 ntBASIC21.86■■□□□ 1.09
FOXN3O00409 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.86■■□□□ 1.09
FOXN3O00409 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
FOXN3O00409 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN3O00409 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN3O00409 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN3O00409 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN3O00409 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN3O00409 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.85■■□□□ 1.09
FOXN3O00409 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.85■■□□□ 1.09
FOXN3O00409 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.85■■□□□ 1.09
FOXN3O00409 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
FOXN3O00409 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN3O00409 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.85■■□□□ 1.09
FOXN3O00409 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN3O00409 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN3O00409 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN3O00409 CNN2P6-201ENST00000439038 900 ntBASIC21.85■■□□□ 1.09
FOXN3O00409 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN3O00409 AC007322.4-201ENST00000509611 723 ntBASIC21.85■■□□□ 1.09
FOXN3O00409 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.85■■□□□ 1.09
FOXN3O00409 FAM21FP-204ENST00000608637 956 ntBASIC21.85■■□□□ 1.09
FOXN3O00409 AC013268.1-206ENST00000638368 961 ntBASIC21.85■■□□□ 1.09
FOXN3O00409 AC112229.1-201ENST00000639295 961 ntBASIC21.85■■□□□ 1.09
FOXN3O00409 PCDHAC2-203ENST00000615316 3011 ntBASIC21.85■■□□□ 1.09
FOXN3O00409 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
FOXN3O00409 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN3O00409 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
FOXN3O00409 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FOXN3O00409 AC112907.3-201ENST00000577781 2400 ntBASIC21.85■■□□□ 1.09
FOXN3O00409 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN3O00409 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
FOXN3O00409 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN3O00409 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXN3O00409 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN3O00409 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN3O00409 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
FOXN3O00409 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXN3O00409 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN3O00409 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN3O00409 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
FOXN3O00409 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.84■■□□□ 1.09
FOXN3O00409 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.84■■□□□ 1.09
FOXN3O00409 AC022517.1-201ENST00000592429 346 ntBASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms