Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.85■□□□□ 0.61
TNFRSF11BO00300 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 SMG8-203ENST00000578922 2178 ntBASIC18.84■□□□□ 0.61
TNFRSF11BO00300 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFRSF11BO00300 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFRSF11BO00300 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TNFRSF11BO00300 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
TNFRSF11BO00300 AC087289.5-201ENST00000586076 3175 ntBASIC18.83■□□□□ 0.61
TNFRSF11BO00300 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.83■□□□□ 0.61
TNFRSF11BO00300 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFRSF11BO00300 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
TNFRSF11BO00300 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.83■□□□□ 0.61
TNFRSF11BO00300 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 AC008175.2-201ENST00000612840 297 ntBASIC18.83■□□□□ 0.6
TNFRSF11BO00300 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TNFRSF11BO00300 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 MIR572-201ENST00000384983 95 ntBASIC18.82■□□□□ 0.6
TNFRSF11BO00300 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 POU5F1P4-201ENST00000413175 1085 ntBASIC18.82■□□□□ 0.6
TNFRSF11BO00300 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 AC027682.1-201ENST00000562846 899 ntBASIC18.82■□□□□ 0.6
TNFRSF11BO00300 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFRSF11BO00300 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.81■□□□□ 0.6
TNFRSF11BO00300 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms