Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 TNXA-203ENST00000507684 2038 ntBASIC14.9□□□□□ -0.02
SMKR1H3BMG3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMKR1H3BMG3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMKR1H3BMG3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMKR1H3BMG3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 AC092720.2-201ENST00000602388 1665 ntBASIC14.87□□□□□ -0.03
SMKR1H3BMG3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.87□□□□□ -0.03
SMKR1H3BMG3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms