Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MBD3L5A6NJ08 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
MBD3L5A6NJ08 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MBD3L5A6NJ08 AL390719.1-204ENST00000412397 1219 ntBASIC18.02■□□□□ 0.48
MBD3L5A6NJ08 KRT8P36-201ENST00000489121 1440 ntBASIC18.02■□□□□ 0.48
MBD3L5A6NJ08 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
MBD3L5A6NJ08 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.02■□□□□ 0.48
MBD3L5A6NJ08 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.02■□□□□ 0.48
MBD3L5A6NJ08 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MBD3L5A6NJ08 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.02■□□□□ 0.47
MBD3L5A6NJ08 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MBD3L5A6NJ08 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
MBD3L5A6NJ08 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
MBD3L5A6NJ08 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
MBD3L5A6NJ08 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MBD3L5A6NJ08 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 AC120498.8-201ENST00000614275 531 ntBASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 AC121338.2-201ENST00000622535 1744 ntBASIC18.01■□□□□ 0.47
MBD3L5A6NJ08 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MBD3L5A6NJ08 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
MBD3L5A6NJ08 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MBD3L5A6NJ08 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
MBD3L5A6NJ08 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MBD3L5A6NJ08 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
MBD3L5A6NJ08 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18■□□□□ 0.47
MBD3L5A6NJ08 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
MBD3L5A6NJ08 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
MBD3L5A6NJ08 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18■□□□□ 0.47
MBD3L5A6NJ08 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18■□□□□ 0.47
MBD3L5A6NJ08 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18■□□□□ 0.47
MBD3L5A6NJ08 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18■□□□□ 0.47
MBD3L5A6NJ08 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18■□□□□ 0.47
MBD3L5A6NJ08 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18■□□□□ 0.47
MBD3L5A6NJ08 USP36-216ENST00000589424 970 ntTSL 5 BASIC18■□□□□ 0.47
MBD3L5A6NJ08 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18■□□□□ 0.47
MBD3L5A6NJ08 FAM197Y4-202ENST00000622692 608 ntBASIC18■□□□□ 0.47
MBD3L5A6NJ08 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
MBD3L5A6NJ08 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MBD3L5A6NJ08 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MBD3L5A6NJ08 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18■□□□□ 0.47
MBD3L5A6NJ08 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
MBD3L5A6NJ08 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MBD3L5A6NJ08 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 RPS2P4-201ENST00000476944 856 ntBASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 AC006557.6-201ENST00000623071 864 ntBASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MBD3L5A6NJ08 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.98■□□□□ 0.47
MBD3L5A6NJ08 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.98■□□□□ 0.47
MBD3L5A6NJ08 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.98■□□□□ 0.47
MBD3L5A6NJ08 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MBD3L5A6NJ08 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms