Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN8A6NHC0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN8A6NHC0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN8A6NHC0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN8A6NHC0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN8A6NHC0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN8A6NHC0 FAM201B-201ENST00000458407 597 ntBASIC20.68■□□□□ 0.9
CAPN8A6NHC0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN8A6NHC0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN8A6NHC0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN8A6NHC0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN8A6NHC0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CAPN8A6NHC0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN8A6NHC0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 AC133552.2-202ENST00000575694 574 ntBASIC20.67■□□□□ 0.9
CAPN8A6NHC0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 OR10C1-204ENST00000622521 1039 ntBASIC20.67■□□□□ 0.9
CAPN8A6NHC0 AC008694.1-202ENST00000636953 945 ntBASIC20.67■□□□□ 0.9
CAPN8A6NHC0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN8A6NHC0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN8A6NHC0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN8A6NHC0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN8A6NHC0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN8A6NHC0 LINC01521-201ENST00000504184 1943 ntBASIC20.65■□□□□ 0.9
CAPN8A6NHC0 AC121338.2-201ENST00000622535 1744 ntBASIC20.65■□□□□ 0.9
CAPN8A6NHC0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.65■□□□□ 0.9
CAPN8A6NHC0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CAPN8A6NHC0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CAPN8A6NHC0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN8A6NHC0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
CAPN8A6NHC0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CAPN8A6NHC0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CAPN8A6NHC0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CAPN8A6NHC0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 KRT18P6-201ENST00000555540 1265 ntBASIC20.64■□□□□ 0.89
CAPN8A6NHC0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 AL121832.2-201ENST00000610979 668 ntBASIC20.64■□□□□ 0.89
CAPN8A6NHC0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CAPN8A6NHC0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 AF201337.1-201ENST00000520239 748 ntBASIC20.63■□□□□ 0.89
CAPN8A6NHC0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 AC142086.2-201ENST00000569753 217 ntBASIC20.63■□□□□ 0.89
CAPN8A6NHC0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN8A6NHC0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms