Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 PGM5P4-201ENST00000421970 445 ntBASIC19.44■□□□□ 0.7
LRIT2A6NDA9 AC093787.1-201ENST00000450396 207 ntBASIC19.44■□□□□ 0.7
LRIT2A6NDA9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.44■□□□□ 0.7
LRIT2A6NDA9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.44■□□□□ 0.7
LRIT2A6NDA9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRIT2A6NDA9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 AP005212.1-201ENST00000581547 1997 ntBASIC19.43■□□□□ 0.7
LRIT2A6NDA9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.43■□□□□ 0.7
LRIT2A6NDA9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 AC006970.2-201ENST00000450065 779 ntBASIC19.42■□□□□ 0.7
LRIT2A6NDA9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.42■□□□□ 0.7
LRIT2A6NDA9 AF201337.1-201ENST00000520239 748 ntBASIC19.42■□□□□ 0.7
LRIT2A6NDA9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 AL356652.1-201ENST00000615962 565 ntBASIC19.42■□□□□ 0.7
LRIT2A6NDA9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRIT2A6NDA9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 AC105036.2-201ENST00000569468 176 ntBASIC19.41■□□□□ 0.7
LRIT2A6NDA9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 CYP2T3P-201ENST00000601990 817 ntBASIC19.41■□□□□ 0.7
LRIT2A6NDA9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.41■□□□□ 0.7
LRIT2A6NDA9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 KRT18P68-201ENST00000392293 1000 ntBASIC19.4■□□□□ 0.7
LRIT2A6NDA9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRIT2A6NDA9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
LRIT2A6NDA9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
LRIT2A6NDA9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.39■□□□□ 0.69
LRIT2A6NDA9 AL355472.2-201ENST00000422958 438 ntBASIC19.39■□□□□ 0.69
LRIT2A6NDA9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.39■□□□□ 0.69
LRIT2A6NDA9 AC083906.2-201ENST00000511578 360 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms