Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 DUX4L18-201ENST00000553347 1267 ntBASIC16.61■□□□□ 0.25
RNF222A6NCQ9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 AC137630.3-201ENST00000607245 391 ntBASIC16.61■□□□□ 0.25
RNF222A6NCQ9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 AC020916.1-201ENST00000587762 1774 ntBASIC16.61■□□□□ 0.25
RNF222A6NCQ9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF222A6NCQ9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 TMEM179-206ENST00000616017 1645 ntBASIC16.6■□□□□ 0.25
RNF222A6NCQ9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF222A6NCQ9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.59■□□□□ 0.25
RNF222A6NCQ9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.59■□□□□ 0.25
RNF222A6NCQ9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 LTB4R2-202ENST00000528054 3092 ntBASIC16.59■□□□□ 0.25
RNF222A6NCQ9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF222A6NCQ9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
RNF222A6NCQ9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RNF222A6NCQ9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF222A6NCQ9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RNF222A6NCQ9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF222A6NCQ9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF222A6NCQ9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF222A6NCQ9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF222A6NCQ9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF222A6NCQ9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF222A6NCQ9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF222A6NCQ9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF222A6NCQ9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF222A6NCQ9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF222A6NCQ9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF222A6NCQ9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF222A6NCQ9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF222A6NCQ9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF222A6NCQ9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF222A6NCQ9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF222A6NCQ9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF222A6NCQ9 AC079598.2-202ENST00000546624 1451 ntBASIC16.57■□□□□ 0.24
RNF222A6NCQ9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF222A6NCQ9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF222A6NCQ9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms