Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC78A2IDD5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC78A2IDD5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC78A2IDD5 AC116050.2-201ENST00000612102 1779 ntBASIC20.66■□□□□ 0.9
CCDC78A2IDD5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC78A2IDD5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC78A2IDD5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC78A2IDD5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC78A2IDD5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC78A2IDD5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC78A2IDD5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC78A2IDD5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC78A2IDD5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC78A2IDD5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC78A2IDD5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 AC016769.1-201ENST00000409132 1010 ntBASIC20.63■□□□□ 0.89
CCDC78A2IDD5 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.63■□□□□ 0.89
CCDC78A2IDD5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC78A2IDD5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 AC011767.1-201ENST00000617410 1153 ntBASIC20.62■□□□□ 0.89
CCDC78A2IDD5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC78A2IDD5 AC112907.3-201ENST00000577781 2400 ntBASIC20.62■□□□□ 0.89
CCDC78A2IDD5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 GABARAPL3-202ENST00000624044 1851 ntBASIC20.61■□□□□ 0.89
CCDC78A2IDD5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 SLC7A5P1-201ENST00000568957 537 ntBASIC20.61■□□□□ 0.89
CCDC78A2IDD5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 AC010536.3-201ENST00000620306 533 ntBASIC20.61■□□□□ 0.89
CCDC78A2IDD5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC78A2IDD5 AC020907.5-201ENST00000624372 1936 ntBASIC20.61■□□□□ 0.89
CCDC78A2IDD5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC78A2IDD5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC78A2IDD5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms