Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 SLC7A5P2-201ENST00000553010 536 ntBASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 DUX4L2-201ENST00000561772 1275 ntBASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 AC104187.1-201ENST00000607510 612 ntBASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 DUX4L6-201ENST00000626483 1275 ntBASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 DUX4L1-201ENST00000627662 1275 ntBASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 DUX4L8-201ENST00000629013 1275 ntBASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 DUX4L3-201ENST00000630187 1275 ntBASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 DUX4L7-201ENST00000630678 1275 ntBASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 DUX4L5-201ENST00000630834 1275 ntBASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.54■□□□□ 0.88
TCRBV9S1A1TA0A576 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.53■□□□□ 0.88
TCRBV9S1A1TA0A576 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV9S1A1TA0A576 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV9S1A1TA0A576 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV9S1A1TA0A576 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV9S1A1TA0A576 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.52■□□□□ 0.88
TCRBV9S1A1TA0A576 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV9S1A1TA0A576 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV9S1A1TA0A576 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.52■□□□□ 0.88
TCRBV9S1A1TA0A576 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV9S1A1TA0A576 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TCRBV9S1A1TA0A576 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV9S1A1TA0A576 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV9S1A1TA0A576 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TCRBV9S1A1TA0A576 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TCRBV9S1A1TA0A576 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.52■□□□□ 0.87
TCRBV9S1A1TA0A576 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
TCRBV9S1A1TA0A576 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
TCRBV9S1A1TA0A576 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TCRBV9S1A1TA0A576 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TCRBV9S1A1TA0A576 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TCRBV9S1A1TA0A576 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 LINC02228-203ENST00000641970 1355 ntBASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 AP001160.3-201ENST00000601484 763 ntBASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV9S1A1TA0A576 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms