Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 PRORSD1P-201ENST00000295112 541 ntBASIC21.98■■□□□ 1.11
SMIM28A0A1B0GU29 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.98■■□□□ 1.11
SMIM28A0A1B0GU29 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.98■■□□□ 1.11
SMIM28A0A1B0GU29 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.98■■□□□ 1.11
SMIM28A0A1B0GU29 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.98■■□□□ 1.11
SMIM28A0A1B0GU29 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.98■■□□□ 1.11
SMIM28A0A1B0GU29 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.98■■□□□ 1.11
SMIM28A0A1B0GU29 AC006058.3-201ENST00000606217 1069 ntBASIC21.98■■□□□ 1.11
SMIM28A0A1B0GU29 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM28A0A1B0GU29 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMIM28A0A1B0GU29 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 UNC93B4-201ENST00000505679 747 ntBASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 AC008687.6-201ENST00000596318 630 ntBASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMIM28A0A1B0GU29 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 KRT8P36-201ENST00000489121 1440 ntBASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMIM28A0A1B0GU29 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM28A0A1B0GU29 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM28A0A1B0GU29 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM28A0A1B0GU29 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SMIM28A0A1B0GU29 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM28A0A1B0GU29 AC128676.1-201ENST00000454392 318 ntBASIC21.95■■□□□ 1.1
SMIM28A0A1B0GU29 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.95■■□□□ 1.1
SMIM28A0A1B0GU29 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
SMIM28A0A1B0GU29 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM28A0A1B0GU29 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM28A0A1B0GU29 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM28A0A1B0GU29 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM28A0A1B0GU29 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM28A0A1B0GU29 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 SOX15-203ENST00000570788 1093 ntBASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM28A0A1B0GU29 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SMIM28A0A1B0GU29 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM28A0A1B0GU29 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.92■■□□□ 1.1
SMIM28A0A1B0GU29 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms