Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV4A0A0B4J268 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 AC116050.2-201ENST00000612102 1779 ntBASIC14.68□□□□□ -0.06
TRAV4A0A0B4J268 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 GABARAPL3-202ENST00000624044 1851 ntBASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 AC243732.1-201ENST00000612648 864 ntBASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 FP700111.2-201ENST00000619190 1892 ntBASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 AL157384.1-201ENST00000445995 2473 ntBASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV4A0A0B4J268 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV4A0A0B4J268 AP005212.1-201ENST00000581547 1997 ntBASIC14.65□□□□□ -0.06
TRAV4A0A0B4J268 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV4A0A0B4J268 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV4A0A0B4J268 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV4A0A0B4J268 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV4A0A0B4J268 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV4A0A0B4J268 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV4A0A0B4J268 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV4A0A0B4J268 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV4A0A0B4J268 AC034268.1-201ENST00000441047 882 ntBASIC14.65□□□□□ -0.06
TRAV4A0A0B4J268 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TRAV4A0A0B4J268 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms