Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.24■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 RCN1P1-201ENST00000400413 996 ntBASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 AC097493.4-201ENST00000641197 219 ntBASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.2■□□□□ 0.82
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms