Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMCO4Q9NRQ5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMCO4Q9NRQ5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SMCO4Q9NRQ5 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.88■□□□□ 0.93
SMCO4Q9NRQ5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMCO4Q9NRQ5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SMCO4Q9NRQ5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMCO4Q9NRQ5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.85■□□□□ 0.93
SMCO4Q9NRQ5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMCO4Q9NRQ5 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMCO4Q9NRQ5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SMCO4Q9NRQ5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMCO4Q9NRQ5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMCO4Q9NRQ5 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMCO4Q9NRQ5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMCO4Q9NRQ5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMCO4Q9NRQ5 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMCO4Q9NRQ5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
SMCO4Q9NRQ5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMCO4Q9NRQ5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMCO4Q9NRQ5 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.82■□□□□ 0.92
SMCO4Q9NRQ5 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMCO4Q9NRQ5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SMCO4Q9NRQ5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.81■□□□□ 0.92
SMCO4Q9NRQ5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.81■□□□□ 0.92
SMCO4Q9NRQ5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SMCO4Q9NRQ5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.8■□□□□ 0.92
SMCO4Q9NRQ5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMCO4Q9NRQ5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMCO4Q9NRQ5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMCO4Q9NRQ5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMCO4Q9NRQ5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMCO4Q9NRQ5 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMCO4Q9NRQ5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMCO4Q9NRQ5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMCO4Q9NRQ5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SMCO4Q9NRQ5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SMCO4Q9NRQ5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.78■□□□□ 0.92
SMCO4Q9NRQ5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SMCO4Q9NRQ5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMCO4Q9NRQ5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMCO4Q9NRQ5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SMCO4Q9NRQ5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.78■□□□□ 0.92
SMCO4Q9NRQ5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.77■□□□□ 0.91
SMCO4Q9NRQ5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMCO4Q9NRQ5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SMCO4Q9NRQ5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMCO4Q9NRQ5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.75■□□□□ 0.91
SMCO4Q9NRQ5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMCO4Q9NRQ5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMCO4Q9NRQ5 AL449106.1-201ENST00000608517 1980 ntBASIC20.74■□□□□ 0.91
SMCO4Q9NRQ5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMCO4Q9NRQ5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMCO4Q9NRQ5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SMCO4Q9NRQ5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.73■□□□□ 0.91
SMCO4Q9NRQ5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMCO4Q9NRQ5 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMCO4Q9NRQ5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMCO4Q9NRQ5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMCO4Q9NRQ5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SMCO4Q9NRQ5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.7■□□□□ 0.9
SMCO4Q9NRQ5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SMCO4Q9NRQ5 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.7■□□□□ 0.9
SMCO4Q9NRQ5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMCO4Q9NRQ5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMCO4Q9NRQ5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMCO4Q9NRQ5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMCO4Q9NRQ5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SMCO4Q9NRQ5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMCO4Q9NRQ5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SMCO4Q9NRQ5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.69■□□□□ 0.9
SMCO4Q9NRQ5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMCO4Q9NRQ5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMCO4Q9NRQ5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMCO4Q9NRQ5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMCO4Q9NRQ5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMCO4Q9NRQ5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SMCO4Q9NRQ5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.68■□□□□ 0.9
SMCO4Q9NRQ5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMCO4Q9NRQ5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMCO4Q9NRQ5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMCO4Q9NRQ5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
SMCO4Q9NRQ5 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMCO4Q9NRQ5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMCO4Q9NRQ5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SMCO4Q9NRQ5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMCO4Q9NRQ5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMCO4Q9NRQ5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMCO4Q9NRQ5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
SMCO4Q9NRQ5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMCO4Q9NRQ5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.63■□□□□ 0.89
SMCO4Q9NRQ5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.62■□□□□ 0.89
SMCO4Q9NRQ5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.62■□□□□ 0.89
SMCO4Q9NRQ5 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMCO4Q9NRQ5 DRD5P2-201ENST00000421395 2012 ntBASIC20.61■□□□□ 0.89
SMCO4Q9NRQ5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMCO4Q9NRQ5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMCO4Q9NRQ5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMCO4Q9NRQ5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMCO4Q9NRQ5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms