Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SH2D4AQ9H788 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.92■■■□□ 2.54
SH2D4AQ9H788 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SH2D4AQ9H788 LINC01971-201ENST00000617888 1048 ntBASIC30.91■■■□□ 2.54
SH2D4AQ9H788 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SH2D4AQ9H788 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.9■■■□□ 2.54
SH2D4AQ9H788 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SH2D4AQ9H788 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.88■■■□□ 2.53
SH2D4AQ9H788 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SH2D4AQ9H788 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
SH2D4AQ9H788 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SH2D4AQ9H788 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.86■■■□□ 2.53
SH2D4AQ9H788 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.86■■■□□ 2.53
SH2D4AQ9H788 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SH2D4AQ9H788 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.85■■■□□ 2.53
SH2D4AQ9H788 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SH2D4AQ9H788 DUX4L11-201ENST00000611504 1267 ntBASIC30.83■■■□□ 2.53
SH2D4AQ9H788 DUX4L12-201ENST00000614593 1267 ntBASIC30.83■■■□□ 2.53
SH2D4AQ9H788 DUX4L14-201ENST00000621227 1267 ntBASIC30.83■■■□□ 2.53
SH2D4AQ9H788 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.82■■■□□ 2.52
SH2D4AQ9H788 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.82■■■□□ 2.52
SH2D4AQ9H788 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SH2D4AQ9H788 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SH2D4AQ9H788 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.81■■■□□ 2.52
SH2D4AQ9H788 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
SH2D4AQ9H788 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SH2D4AQ9H788 MIR639-201ENST00000384974 98 ntBASIC30.78■■■□□ 2.52
SH2D4AQ9H788 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.78■■■□□ 2.52
SH2D4AQ9H788 MIR3648-2-201ENST00000581792 180 ntBASIC30.78■■■□□ 2.52
SH2D4AQ9H788 MIR3648-1-201ENST00000615959 180 ntBASIC30.78■■■□□ 2.52
SH2D4AQ9H788 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SH2D4AQ9H788 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.77■■■□□ 2.52
SH2D4AQ9H788 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.76■■■□□ 2.51
SH2D4AQ9H788 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.76■■■□□ 2.51
SH2D4AQ9H788 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.75■■■□□ 2.51
SH2D4AQ9H788 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SH2D4AQ9H788 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.75■■■□□ 2.51
SH2D4AQ9H788 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
SH2D4AQ9H788 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.74■■■□□ 2.51
SH2D4AQ9H788 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
SH2D4AQ9H788 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SH2D4AQ9H788 AC016575.1-201ENST00000607026 382 ntBASIC30.73■■■□□ 2.51
SH2D4AQ9H788 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SH2D4AQ9H788 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.73■■■□□ 2.51
SH2D4AQ9H788 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SH2D4AQ9H788 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.72■■■□□ 2.51
SH2D4AQ9H788 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SH2D4AQ9H788 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.71■■■□□ 2.51
SH2D4AQ9H788 MIR4449-201ENST00000578365 66 ntBASIC30.71■■■□□ 2.51
SH2D4AQ9H788 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SH2D4AQ9H788 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SH2D4AQ9H788 CR559946.2-201ENST00000623684 991 ntBASIC30.7■■■□□ 2.51
SH2D4AQ9H788 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
SH2D4AQ9H788 AC010864.1-201ENST00000609407 1511 ntBASIC30.69■■■□□ 2.5
SH2D4AQ9H788 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SH2D4AQ9H788 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.68■■■□□ 2.5
SH2D4AQ9H788 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SH2D4AQ9H788 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SH2D4AQ9H788 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SH2D4AQ9H788 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SH2D4AQ9H788 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.67■■■□□ 2.5
SH2D4AQ9H788 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SH2D4AQ9H788 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.66■■■□□ 2.5
SH2D4AQ9H788 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
SH2D4AQ9H788 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.65■■■□□ 2.5
SH2D4AQ9H788 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.5
SH2D4AQ9H788 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SH2D4AQ9H788 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SH2D4AQ9H788 DUX4L13-201ENST00000554103 1267 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L15-201ENST00000611059 1267 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L23-201ENST00000615195 1269 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L24-201ENST00000617576 1269 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L22-201ENST00000618238 1269 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L20-201ENST00000619712 1269 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L21-201ENST00000622058 1269 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L10-201ENST00000622460 1267 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 DUX4L25-201ENST00000624915 1269 ntBASIC30.63■■■□□ 2.49
SH2D4AQ9H788 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SH2D4AQ9H788 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SH2D4AQ9H788 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SH2D4AQ9H788 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SH2D4AQ9H788 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.61■■■□□ 2.49
SH2D4AQ9H788 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SH2D4AQ9H788 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SH2D4AQ9H788 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SH2D4AQ9H788 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.59■■■□□ 2.49
SH2D4AQ9H788 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.59■■■□□ 2.49
SH2D4AQ9H788 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
SH2D4AQ9H788 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
SH2D4AQ9H788 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.59■■■□□ 2.49
SH2D4AQ9H788 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SH2D4AQ9H788 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SH2D4AQ9H788 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SH2D4AQ9H788 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SH2D4AQ9H788 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SH2D4AQ9H788 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SH2D4AQ9H788 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SH2D4AQ9H788 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SH2D4AQ9H788 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SH2D4AQ9H788 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms