Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CRNKL1Q9BZJ0 ZNRF2P2-203ENST00000454624 420 ntBASIC31.59■■■□□ 2.65
CRNKL1Q9BZJ0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CRNKL1Q9BZJ0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CRNKL1Q9BZJ0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.56■■■□□ 2.64
CRNKL1Q9BZJ0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CRNKL1Q9BZJ0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CRNKL1Q9BZJ0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CRNKL1Q9BZJ0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CRNKL1Q9BZJ0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CRNKL1Q9BZJ0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CRNKL1Q9BZJ0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.52■■■□□ 2.64
CRNKL1Q9BZJ0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.52■■■□□ 2.64
CRNKL1Q9BZJ0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
CRNKL1Q9BZJ0 AC010864.1-201ENST00000609407 1511 ntBASIC31.51■■■□□ 2.63
CRNKL1Q9BZJ0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.5■■■□□ 2.63
CRNKL1Q9BZJ0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.5■■■□□ 2.63
CRNKL1Q9BZJ0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CRNKL1Q9BZJ0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.49■■■□□ 2.63
CRNKL1Q9BZJ0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
CRNKL1Q9BZJ0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CRNKL1Q9BZJ0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.47■■■□□ 2.63
CRNKL1Q9BZJ0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
CRNKL1Q9BZJ0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
CRNKL1Q9BZJ0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
CRNKL1Q9BZJ0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.45■■■□□ 2.63
CRNKL1Q9BZJ0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.44■■■□□ 2.62
CRNKL1Q9BZJ0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
CRNKL1Q9BZJ0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.44■■■□□ 2.62
CRNKL1Q9BZJ0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CRNKL1Q9BZJ0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CRNKL1Q9BZJ0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
CRNKL1Q9BZJ0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
CRNKL1Q9BZJ0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.43■■■□□ 2.62
CRNKL1Q9BZJ0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CRNKL1Q9BZJ0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CRNKL1Q9BZJ0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CRNKL1Q9BZJ0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CRNKL1Q9BZJ0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CRNKL1Q9BZJ0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.41■■■□□ 2.62
CRNKL1Q9BZJ0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
CRNKL1Q9BZJ0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
CRNKL1Q9BZJ0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CRNKL1Q9BZJ0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.39■■■□□ 2.62
CRNKL1Q9BZJ0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CRNKL1Q9BZJ0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.38■■■□□ 2.61
CRNKL1Q9BZJ0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CRNKL1Q9BZJ0 AL135925.1-201ENST00000605920 1701 ntBASIC31.38■■■□□ 2.61
CRNKL1Q9BZJ0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CRNKL1Q9BZJ0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.35■■■□□ 2.61
CRNKL1Q9BZJ0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.34■■■□□ 2.61
CRNKL1Q9BZJ0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.32■■■□□ 2.6
CRNKL1Q9BZJ0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CRNKL1Q9BZJ0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CRNKL1Q9BZJ0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
CRNKL1Q9BZJ0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
CRNKL1Q9BZJ0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CRNKL1Q9BZJ0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CRNKL1Q9BZJ0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
CRNKL1Q9BZJ0 LINC01971-201ENST00000617888 1048 ntBASIC31.28■■■□□ 2.6
CRNKL1Q9BZJ0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CRNKL1Q9BZJ0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CRNKL1Q9BZJ0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
CRNKL1Q9BZJ0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CRNKL1Q9BZJ0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.27■■■□□ 2.6
CRNKL1Q9BZJ0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.26■■■□□ 2.59
CRNKL1Q9BZJ0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.25■■■□□ 2.59
CRNKL1Q9BZJ0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CRNKL1Q9BZJ0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.24■■■□□ 2.59
CRNKL1Q9BZJ0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CRNKL1Q9BZJ0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CRNKL1Q9BZJ0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CRNKL1Q9BZJ0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.22■■■□□ 2.59
CRNKL1Q9BZJ0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CRNKL1Q9BZJ0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
CRNKL1Q9BZJ0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
CRNKL1Q9BZJ0 HLA-V-202ENST00000446817 847 ntBASIC31.2■■■□□ 2.59
CRNKL1Q9BZJ0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.2■■■□□ 2.59
CRNKL1Q9BZJ0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.2■■■□□ 2.59
CRNKL1Q9BZJ0 DUX4L11-201ENST00000611504 1267 ntBASIC31.2■■■□□ 2.59
CRNKL1Q9BZJ0 DUX4L12-201ENST00000614593 1267 ntBASIC31.2■■■□□ 2.59
CRNKL1Q9BZJ0 DUX4L14-201ENST00000621227 1267 ntBASIC31.2■■■□□ 2.59
CRNKL1Q9BZJ0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
CRNKL1Q9BZJ0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
CRNKL1Q9BZJ0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CRNKL1Q9BZJ0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CRNKL1Q9BZJ0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.18■■■□□ 2.58
CRNKL1Q9BZJ0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CRNKL1Q9BZJ0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.17■■■□□ 2.58
CRNKL1Q9BZJ0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.16■■■□□ 2.58
CRNKL1Q9BZJ0 AC127502.1-201ENST00000399971 1502 ntBASIC31.16■■■□□ 2.58
CRNKL1Q9BZJ0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CRNKL1Q9BZJ0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.15■■■□□ 2.58
CRNKL1Q9BZJ0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.15■■■□□ 2.58
CRNKL1Q9BZJ0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CRNKL1Q9BZJ0 LINC00273-201ENST00000539813 1452 ntBASIC31.14■■■□□ 2.58
CRNKL1Q9BZJ0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
CRNKL1Q9BZJ0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.14■■■□□ 2.58
CRNKL1Q9BZJ0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
CRNKL1Q9BZJ0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms