Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
ACAP3Q96P50 DUX4L29-201ENST00000425409 679 ntBASIC28.67■■■□□ 2.18
ACAP3Q96P50 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.67■■■□□ 2.18
ACAP3Q96P50 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
ACAP3Q96P50 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.66■■■□□ 2.18
ACAP3Q96P50 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ACAP3Q96P50 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
ACAP3Q96P50 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ACAP3Q96P50 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.64■■■□□ 2.18
ACAP3Q96P50 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ACAP3Q96P50 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.64■■■□□ 2.18
ACAP3Q96P50 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.63■■■□□ 2.17
ACAP3Q96P50 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.63■■■□□ 2.17
ACAP3Q96P50 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.62■■■□□ 2.17
ACAP3Q96P50 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.62■■■□□ 2.17
ACAP3Q96P50 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
ACAP3Q96P50 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.61■■■□□ 2.17
ACAP3Q96P50 AC010864.1-201ENST00000609407 1511 ntBASIC28.61■■■□□ 2.17
ACAP3Q96P50 AC021231.2-201ENST00000594613 730 ntBASIC28.61■■■□□ 2.17
ACAP3Q96P50 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ACAP3Q96P50 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.59■■■□□ 2.17
ACAP3Q96P50 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ACAP3Q96P50 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.58■■■□□ 2.17
ACAP3Q96P50 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ACAP3Q96P50 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ACAP3Q96P50 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.58■■■□□ 2.16
ACAP3Q96P50 ZNRF2P2-203ENST00000454624 420 ntBASIC28.57■■■□□ 2.16
ACAP3Q96P50 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.56■■■□□ 2.16
ACAP3Q96P50 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.56■■■□□ 2.16
ACAP3Q96P50 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
ACAP3Q96P50 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ACAP3Q96P50 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ACAP3Q96P50 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
ACAP3Q96P50 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ACAP3Q96P50 AL135925.1-201ENST00000605920 1701 ntBASIC28.55■■■□□ 2.16
ACAP3Q96P50 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ACAP3Q96P50 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
ACAP3Q96P50 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.53■■■□□ 2.16
ACAP3Q96P50 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ACAP3Q96P50 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.53■■■□□ 2.16
ACAP3Q96P50 MIR7108-201ENST00000614319 87 ntBASIC28.53■■■□□ 2.16
ACAP3Q96P50 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
ACAP3Q96P50 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
ACAP3Q96P50 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.52■■■□□ 2.16
ACAP3Q96P50 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.51■■■□□ 2.16
ACAP3Q96P50 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ACAP3Q96P50 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.5■■■□□ 2.15
ACAP3Q96P50 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
ACAP3Q96P50 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.5■■■□□ 2.15
ACAP3Q96P50 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ACAP3Q96P50 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.49■■■□□ 2.15
ACAP3Q96P50 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ACAP3Q96P50 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
ACAP3Q96P50 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
ACAP3Q96P50 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ACAP3Q96P50 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ACAP3Q96P50 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.46■■■□□ 2.15
ACAP3Q96P50 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.46■■■□□ 2.15
ACAP3Q96P50 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
ACAP3Q96P50 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.15
ACAP3Q96P50 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.45■■■□□ 2.14
ACAP3Q96P50 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ACAP3Q96P50 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
ACAP3Q96P50 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.44■■■□□ 2.14
ACAP3Q96P50 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.44■■■□□ 2.14
ACAP3Q96P50 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ACAP3Q96P50 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
ACAP3Q96P50 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ACAP3Q96P50 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.42■■■□□ 2.14
ACAP3Q96P50 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ACAP3Q96P50 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ACAP3Q96P50 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.4■■■□□ 2.14
ACAP3Q96P50 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
ACAP3Q96P50 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.39■■■□□ 2.14
ACAP3Q96P50 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
ACAP3Q96P50 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
ACAP3Q96P50 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ACAP3Q96P50 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.36■■■□□ 2.13
ACAP3Q96P50 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ACAP3Q96P50 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.35■■■□□ 2.13
ACAP3Q96P50 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ACAP3Q96P50 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ACAP3Q96P50 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
ACAP3Q96P50 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ACAP3Q96P50 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
ACAP3Q96P50 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
ACAP3Q96P50 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ACAP3Q96P50 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.31■■■□□ 2.12
ACAP3Q96P50 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
ACAP3Q96P50 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
ACAP3Q96P50 LINC01971-201ENST00000617888 1048 ntBASIC28.3■■■□□ 2.12
ACAP3Q96P50 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
ACAP3Q96P50 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
ACAP3Q96P50 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.29■■■□□ 2.12
ACAP3Q96P50 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.29■■■□□ 2.12
ACAP3Q96P50 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.29■■■□□ 2.12
ACAP3Q96P50 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
ACAP3Q96P50 ST7-AS1-201ENST00000456775 1889 ntBASIC28.29■■■□□ 2.12
ACAP3Q96P50 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.29■■■□□ 2.12
ACAP3Q96P50 AC127502.1-201ENST00000399971 1502 ntBASIC28.28■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms