Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
COL21A1Q96P44 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
COL21A1Q96P44 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.64■■□□□ 1.54
COL21A1Q96P44 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL21A1Q96P44 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL21A1Q96P44 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL21A1Q96P44 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.63■■□□□ 1.53
COL21A1Q96P44 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL21A1Q96P44 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL21A1Q96P44 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL21A1Q96P44 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL21A1Q96P44 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.62■■□□□ 1.53
COL21A1Q96P44 MIR762-201ENST00000390236 83 ntBASIC24.62■■□□□ 1.53
COL21A1Q96P44 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
COL21A1Q96P44 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.61■■□□□ 1.53
COL21A1Q96P44 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.61■■□□□ 1.53
COL21A1Q96P44 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
COL21A1Q96P44 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL21A1Q96P44 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL21A1Q96P44 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL21A1Q96P44 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
COL21A1Q96P44 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL21A1Q96P44 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.58■■□□□ 1.53
COL21A1Q96P44 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.58■■□□□ 1.53
COL21A1Q96P44 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL21A1Q96P44 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL21A1Q96P44 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL21A1Q96P44 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
COL21A1Q96P44 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
COL21A1Q96P44 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL21A1Q96P44 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
COL21A1Q96P44 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL21A1Q96P44 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL21A1Q96P44 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL21A1Q96P44 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.54■■□□□ 1.52
COL21A1Q96P44 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
COL21A1Q96P44 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL21A1Q96P44 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL21A1Q96P44 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
COL21A1Q96P44 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COL21A1Q96P44 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.53■■□□□ 1.52
COL21A1Q96P44 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COL21A1Q96P44 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COL21A1Q96P44 AP006261.1-201ENST00000584783 668 ntBASIC24.52■■□□□ 1.52
COL21A1Q96P44 AC005559.1-201ENST00000589661 871 ntBASIC24.52■■□□□ 1.52
COL21A1Q96P44 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
COL21A1Q96P44 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL21A1Q96P44 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL21A1Q96P44 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL21A1Q96P44 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL21A1Q96P44 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.5■■□□□ 1.51
COL21A1Q96P44 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL21A1Q96P44 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.49■■□□□ 1.51
COL21A1Q96P44 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL21A1Q96P44 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL21A1Q96P44 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL21A1Q96P44 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL21A1Q96P44 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.47■■□□□ 1.51
COL21A1Q96P44 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.47■■□□□ 1.51
COL21A1Q96P44 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL21A1Q96P44 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.46■■□□□ 1.51
COL21A1Q96P44 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.46■■□□□ 1.51
COL21A1Q96P44 MIR3665-201ENST00000578708 105 ntBASIC24.46■■□□□ 1.51
COL21A1Q96P44 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COL21A1Q96P44 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL21A1Q96P44 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
COL21A1Q96P44 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
COL21A1Q96P44 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.45■■□□□ 1.5
COL21A1Q96P44 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL21A1Q96P44 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
COL21A1Q96P44 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COL21A1Q96P44 DUX4L28-201ENST00000623687 678 ntBASIC24.43■■□□□ 1.5
COL21A1Q96P44 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
COL21A1Q96P44 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL21A1Q96P44 AL162393.1-201ENST00000437852 946 ntBASIC24.42■■□□□ 1.5
COL21A1Q96P44 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.42■■□□□ 1.5
COL21A1Q96P44 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL21A1Q96P44 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL21A1Q96P44 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL21A1Q96P44 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL21A1Q96P44 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.42■■□□□ 1.5
COL21A1Q96P44 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL21A1Q96P44 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.41■■□□□ 1.5
COL21A1Q96P44 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL21A1Q96P44 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL21A1Q96P44 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
COL21A1Q96P44 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.39■■□□□ 1.49
COL21A1Q96P44 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
COL21A1Q96P44 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL21A1Q96P44 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
COL21A1Q96P44 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.38■■□□□ 1.49
COL21A1Q96P44 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
COL21A1Q96P44 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
COL21A1Q96P44 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.37■■□□□ 1.49
COL21A1Q96P44 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL21A1Q96P44 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL21A1Q96P44 AC010864.1-201ENST00000609407 1511 ntBASIC24.36■■□□□ 1.49
COL21A1Q96P44 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL21A1Q96P44 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.36■■□□□ 1.49
COL21A1Q96P44 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms