Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
DDX11Q96FC9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.11■■■□□ 2.57
DDX11Q96FC9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
DDX11Q96FC9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
DDX11Q96FC9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.11■■■□□ 2.57
DDX11Q96FC9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.11■■■□□ 2.57
DDX11Q96FC9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
DDX11Q96FC9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
DDX11Q96FC9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.1■■■□□ 2.57
DDX11Q96FC9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
DDX11Q96FC9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
DDX11Q96FC9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
DDX11Q96FC9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
DDX11Q96FC9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
DDX11Q96FC9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
DDX11Q96FC9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.07■■■□□ 2.56
DDX11Q96FC9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
DDX11Q96FC9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
DDX11Q96FC9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
DDX11Q96FC9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
DDX11Q96FC9 ABCB10P3-201ENST00000561950 2166 ntBASIC31.06■■■□□ 2.56
DDX11Q96FC9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
DDX11Q96FC9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
DDX11Q96FC9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.06■■■□□ 2.56
DDX11Q96FC9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.06■■■□□ 2.56
DDX11Q96FC9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
DDX11Q96FC9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
DDX11Q96FC9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
DDX11Q96FC9 AC139426.1-201ENST00000568218 2529 ntBASIC31.05■■■□□ 2.56
DDX11Q96FC9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
DDX11Q96FC9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
DDX11Q96FC9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
DDX11Q96FC9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
DDX11Q96FC9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.03■■■□□ 2.56
DDX11Q96FC9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.03■■■□□ 2.56
DDX11Q96FC9 AL135925.1-201ENST00000605920 1701 ntBASIC31.03■■■□□ 2.56
DDX11Q96FC9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.02■■■□□ 2.56
DDX11Q96FC9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
DDX11Q96FC9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
DDX11Q96FC9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
DDX11Q96FC9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
DDX11Q96FC9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31■■■□□ 2.55
DDX11Q96FC9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
DDX11Q96FC9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
DDX11Q96FC9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.98■■■□□ 2.55
DDX11Q96FC9 ZNRF2P2-203ENST00000454624 420 ntBASIC30.97■■■□□ 2.55
DDX11Q96FC9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
DDX11Q96FC9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
DDX11Q96FC9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
DDX11Q96FC9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
DDX11Q96FC9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
DDX11Q96FC9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
DDX11Q96FC9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
DDX11Q96FC9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
DDX11Q96FC9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.93■■■□□ 2.54
DDX11Q96FC9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
DDX11Q96FC9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
DDX11Q96FC9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
DDX11Q96FC9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
DDX11Q96FC9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
DDX11Q96FC9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
DDX11Q96FC9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
DDX11Q96FC9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
DDX11Q96FC9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.91■■■□□ 2.54
DDX11Q96FC9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.91■■■□□ 2.54
DDX11Q96FC9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.91■■■□□ 2.54
DDX11Q96FC9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.9■■■□□ 2.54
DDX11Q96FC9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
DDX11Q96FC9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
DDX11Q96FC9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.89■■■□□ 2.53
DDX11Q96FC9 HLA-V-202ENST00000446817 847 ntBASIC30.88■■■□□ 2.53
DDX11Q96FC9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
DDX11Q96FC9 DUX4L29-201ENST00000425409 679 ntBASIC30.87■■■□□ 2.53
DDX11Q96FC9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
DDX11Q96FC9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.86■■■□□ 2.53
DDX11Q96FC9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.86■■■□□ 2.53
DDX11Q96FC9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.86■■■□□ 2.53
DDX11Q96FC9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.86■■■□□ 2.53
DDX11Q96FC9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
DDX11Q96FC9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
DDX11Q96FC9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.85■■■□□ 2.53
DDX11Q96FC9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
DDX11Q96FC9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
DDX11Q96FC9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
DDX11Q96FC9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
DDX11Q96FC9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
DDX11Q96FC9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
DDX11Q96FC9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.82■■■□□ 2.52
DDX11Q96FC9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
DDX11Q96FC9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
DDX11Q96FC9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
DDX11Q96FC9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.8■■■□□ 2.52
DDX11Q96FC9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
DDX11Q96FC9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
DDX11Q96FC9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
DDX11Q96FC9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.79■■■□□ 2.52
DDX11Q96FC9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
DDX11Q96FC9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.79■■■□□ 2.52
DDX11Q96FC9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.79■■■□□ 2.52
DDX11Q96FC9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms