Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 BRD4-212ENST00000630599 726 ntTSL 2 BASIC33.04■■■□□ 2.88
RPGRQ92834 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC33.04■■■□□ 2.88
RPGRQ92834 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
RPGRQ92834 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
RPGRQ92834 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.02■■■□□ 2.88
RPGRQ92834 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
RPGRQ92834 ABHD17AP3-201ENST00000503096 1137 ntBASIC33.02■■■□□ 2.88
RPGRQ92834 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.88
RPGRQ92834 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
RPGRQ92834 DUX4L13-201ENST00000554103 1267 ntBASIC33.01■■■□□ 2.87
RPGRQ92834 DUX4L15-201ENST00000611059 1267 ntBASIC33.01■■■□□ 2.87
RPGRQ92834 DUX4L23-201ENST00000615195 1269 ntBASIC33.01■■■□□ 2.87
RPGRQ92834 DUX4L24-201ENST00000617576 1269 ntBASIC33.01■■■□□ 2.87
RPGRQ92834 DUX4L22-201ENST00000618238 1269 ntBASIC33.01■■■□□ 2.87
RPGRQ92834 DUX4L20-201ENST00000619712 1269 ntBASIC33.01■■■□□ 2.87
RPGRQ92834 DUX4L21-201ENST00000622058 1269 ntBASIC33.01■■■□□ 2.87
RPGRQ92834 DUX4L10-201ENST00000622460 1267 ntBASIC33.01■■■□□ 2.87
RPGRQ92834 DUX4L25-201ENST00000624915 1269 ntBASIC33.01■■■□□ 2.87
RPGRQ92834 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
RPGRQ92834 EI24-212ENST00000615917 1407 ntTSL 2 BASIC33■■■□□ 2.87
RPGRQ92834 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.99■■■□□ 2.87
RPGRQ92834 METRNL-202ENST00000570778 967 ntTSL 5 BASIC32.98■■■□□ 2.87
RPGRQ92834 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.97■■■□□ 2.87
RPGRQ92834 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.97■■■□□ 2.87
RPGRQ92834 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
RPGRQ92834 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.96■■■□□ 2.87
RPGRQ92834 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
RPGRQ92834 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
RPGRQ92834 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
RPGRQ92834 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
RPGRQ92834 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC32.95■■■□□ 2.87
RPGRQ92834 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC32.95■■■□□ 2.87
RPGRQ92834 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.95■■■□□ 2.86
RPGRQ92834 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.94■■■□□ 2.86
RPGRQ92834 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
RPGRQ92834 HES6-205ENST00000409356 528 ntTSL 2 BASIC32.93■■■□□ 2.86
RPGRQ92834 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
RPGRQ92834 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
RPGRQ92834 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.9■■■□□ 2.86
RPGRQ92834 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.9■■■□□ 2.86
RPGRQ92834 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.9■■■□□ 2.86
RPGRQ92834 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.88■■■□□ 2.85
RPGRQ92834 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
RPGRQ92834 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.88■■■□□ 2.85
RPGRQ92834 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
RPGRQ92834 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
RPGRQ92834 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
RPGRQ92834 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.85■■■□□ 2.85
RPGRQ92834 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.84■■■□□ 2.85
RPGRQ92834 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RPGRQ92834 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
RPGRQ92834 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
RPGRQ92834 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
RPGRQ92834 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.82■■■□□ 2.84
RPGRQ92834 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.82■■■□□ 2.84
RPGRQ92834 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.81■■■□□ 2.84
RPGRQ92834 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.81■■■□□ 2.84
RPGRQ92834 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
RPGRQ92834 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
RPGRQ92834 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
RPGRQ92834 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
RPGRQ92834 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.77■■■□□ 2.84
RPGRQ92834 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
RPGRQ92834 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
RPGRQ92834 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.75■■■□□ 2.83
RPGRQ92834 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.75■■■□□ 2.83
RPGRQ92834 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
RPGRQ92834 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RPGRQ92834 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.74■■■□□ 2.83
RPGRQ92834 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.73■■■□□ 2.83
RPGRQ92834 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
RPGRQ92834 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.71■■■□□ 2.83
RPGRQ92834 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
RPGRQ92834 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
RPGRQ92834 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
RPGRQ92834 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
RPGRQ92834 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
RPGRQ92834 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
RPGRQ92834 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
RPGRQ92834 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
RPGRQ92834 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
RPGRQ92834 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
RPGRQ92834 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.7■■■□□ 2.83
RPGRQ92834 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.7■■■□□ 2.83
RPGRQ92834 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.7■■■□□ 2.83
RPGRQ92834 AL161658.1-201ENST00000623641 1967 ntBASIC32.7■■■□□ 2.82
RPGRQ92834 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.69■■■□□ 2.82
RPGRQ92834 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
RPGRQ92834 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
RPGRQ92834 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.68■■■□□ 2.82
RPGRQ92834 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.68■■■□□ 2.82
RPGRQ92834 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
RPGRQ92834 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.68■■■□□ 2.82
RPGRQ92834 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
RPGRQ92834 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
RPGRQ92834 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
RPGRQ92834 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.66■■■□□ 2.82
RPGRQ92834 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.66■■■□□ 2.82
RPGRQ92834 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.66■■■□□ 2.82
RPGRQ92834 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC32.65■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms