Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SNED1Q8TER0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC32.81■■■□□ 2.84
SNED1Q8TER0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SNED1Q8TER0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.8■■■□□ 2.84
SNED1Q8TER0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC32.8■■■□□ 2.84
SNED1Q8TER0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
SNED1Q8TER0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.79■■■□□ 2.84
SNED1Q8TER0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
SNED1Q8TER0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.78■■■□□ 2.84
SNED1Q8TER0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.77■■■□□ 2.84
SNED1Q8TER0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.76■■■□□ 2.83
SNED1Q8TER0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SNED1Q8TER0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.75■■■□□ 2.83
SNED1Q8TER0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.75■■■□□ 2.83
SNED1Q8TER0 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SNED1Q8TER0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SNED1Q8TER0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.73■■■□□ 2.83
SNED1Q8TER0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC32.73■■■□□ 2.83
SNED1Q8TER0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.73■■■□□ 2.83
SNED1Q8TER0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.71■■■□□ 2.83
SNED1Q8TER0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.71■■■□□ 2.83
SNED1Q8TER0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SNED1Q8TER0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
SNED1Q8TER0 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.69■■■□□ 2.82
SNED1Q8TER0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.68■■■□□ 2.82
SNED1Q8TER0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.68■■■□□ 2.82
SNED1Q8TER0 HES6-205ENST00000409356 528 ntTSL 2 BASIC32.68■■■□□ 2.82
SNED1Q8TER0 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
SNED1Q8TER0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32.64■■■□□ 2.82
SNED1Q8TER0 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.64■■■□□ 2.82
SNED1Q8TER0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.64■■■□□ 2.82
SNED1Q8TER0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
SNED1Q8TER0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
SNED1Q8TER0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
SNED1Q8TER0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.63■■■□□ 2.81
SNED1Q8TER0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.63■■■□□ 2.81
SNED1Q8TER0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
SNED1Q8TER0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.62■■■□□ 2.81
SNED1Q8TER0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
SNED1Q8TER0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.61■■■□□ 2.81
SNED1Q8TER0 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
SNED1Q8TER0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
SNED1Q8TER0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
SNED1Q8TER0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.6■■■□□ 2.81
SNED1Q8TER0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
SNED1Q8TER0 RARRES2P2-201ENST00000394842 485 ntBASIC32.6■■■□□ 2.81
SNED1Q8TER0 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
SNED1Q8TER0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
SNED1Q8TER0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SNED1Q8TER0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SNED1Q8TER0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
SNED1Q8TER0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
SNED1Q8TER0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
SNED1Q8TER0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.54■■■□□ 2.8
SNED1Q8TER0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.54■■■□□ 2.8
SNED1Q8TER0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SNED1Q8TER0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SNED1Q8TER0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SNED1Q8TER0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SNED1Q8TER0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SNED1Q8TER0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
SNED1Q8TER0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
SNED1Q8TER0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
SNED1Q8TER0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SNED1Q8TER0 AC120057.4-201ENST00000624722 1615 ntBASIC32.53■■■□□ 2.8
SNED1Q8TER0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SNED1Q8TER0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.79
SNED1Q8TER0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
SNED1Q8TER0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
SNED1Q8TER0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SNED1Q8TER0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
SNED1Q8TER0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
SNED1Q8TER0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.48■■■□□ 2.79
SNED1Q8TER0 ABHD17AP5-201ENST00000580133 923 ntBASIC32.48■■■□□ 2.79
SNED1Q8TER0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
SNED1Q8TER0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.45■■■□□ 2.79
SNED1Q8TER0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SNED1Q8TER0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SNED1Q8TER0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SNED1Q8TER0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SNED1Q8TER0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SNED1Q8TER0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC32.42■■■□□ 2.78
SNED1Q8TER0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
SNED1Q8TER0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.41■■■□□ 2.78
SNED1Q8TER0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
SNED1Q8TER0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
SNED1Q8TER0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
SNED1Q8TER0 LINC00273-201ENST00000539813 1452 ntBASIC32.38■■■□□ 2.77
SNED1Q8TER0 GPX1-201ENST00000419349 1106 ntBASIC32.38■■■□□ 2.77
SNED1Q8TER0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SNED1Q8TER0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.37■■■□□ 2.77
SNED1Q8TER0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
SNED1Q8TER0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.37■■■□□ 2.77
SNED1Q8TER0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
SNED1Q8TER0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.36■■■□□ 2.77
SNED1Q8TER0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
SNED1Q8TER0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SNED1Q8TER0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
SNED1Q8TER0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
SNED1Q8TER0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms