Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
SHCBP1Q8NEM2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
SHCBP1Q8NEM2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
SHCBP1Q8NEM2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
SHCBP1Q8NEM2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.41■■■□□ 2.46
SHCBP1Q8NEM2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
SHCBP1Q8NEM2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.4■■■□□ 2.46
SHCBP1Q8NEM2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SHCBP1Q8NEM2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.39■■■□□ 2.46
SHCBP1Q8NEM2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
SHCBP1Q8NEM2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SHCBP1Q8NEM2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SHCBP1Q8NEM2 DUX4L13-201ENST00000554103 1267 ntBASIC30.37■■■□□ 2.45
SHCBP1Q8NEM2 DUX4L15-201ENST00000611059 1267 ntBASIC30.37■■■□□ 2.45
SHCBP1Q8NEM2 DUX4L23-201ENST00000615195 1269 ntBASIC30.37■■■□□ 2.45
SHCBP1Q8NEM2 DUX4L24-201ENST00000617576 1269 ntBASIC30.37■■■□□ 2.45
SHCBP1Q8NEM2 DUX4L22-201ENST00000618238 1269 ntBASIC30.37■■■□□ 2.45
SHCBP1Q8NEM2 DUX4L20-201ENST00000619712 1269 ntBASIC30.37■■■□□ 2.45
SHCBP1Q8NEM2 DUX4L21-201ENST00000622058 1269 ntBASIC30.37■■■□□ 2.45
SHCBP1Q8NEM2 DUX4L10-201ENST00000622460 1267 ntBASIC30.37■■■□□ 2.45
SHCBP1Q8NEM2 DUX4L25-201ENST00000624915 1269 ntBASIC30.37■■■□□ 2.45
SHCBP1Q8NEM2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SHCBP1Q8NEM2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SHCBP1Q8NEM2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SHCBP1Q8NEM2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SHCBP1Q8NEM2 HSD17B1P1-201ENST00000590052 955 ntBASIC30.36■■■□□ 2.45
SHCBP1Q8NEM2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
SHCBP1Q8NEM2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SHCBP1Q8NEM2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
SHCBP1Q8NEM2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SHCBP1Q8NEM2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SHCBP1Q8NEM2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SHCBP1Q8NEM2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SHCBP1Q8NEM2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.29■■■□□ 2.44
SHCBP1Q8NEM2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.29■■■□□ 2.44
SHCBP1Q8NEM2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.29■■■□□ 2.44
SHCBP1Q8NEM2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.28■■■□□ 2.44
SHCBP1Q8NEM2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SHCBP1Q8NEM2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SHCBP1Q8NEM2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SHCBP1Q8NEM2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SHCBP1Q8NEM2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
SHCBP1Q8NEM2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.26■■■□□ 2.43
SHCBP1Q8NEM2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SHCBP1Q8NEM2 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.25■■■□□ 2.43
SHCBP1Q8NEM2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
SHCBP1Q8NEM2 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.24■■■□□ 2.43
SHCBP1Q8NEM2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.24■■■□□ 2.43
SHCBP1Q8NEM2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
SHCBP1Q8NEM2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SHCBP1Q8NEM2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SHCBP1Q8NEM2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SHCBP1Q8NEM2 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.22■■■□□ 2.43
SHCBP1Q8NEM2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
SHCBP1Q8NEM2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
SHCBP1Q8NEM2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
SHCBP1Q8NEM2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.2■■■□□ 2.43
SHCBP1Q8NEM2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.2■■■□□ 2.43
SHCBP1Q8NEM2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SHCBP1Q8NEM2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
SHCBP1Q8NEM2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
SHCBP1Q8NEM2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
SHCBP1Q8NEM2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.15■■■□□ 2.42
SHCBP1Q8NEM2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.15■■■□□ 2.42
SHCBP1Q8NEM2 AL161658.1-201ENST00000623641 1967 ntBASIC30.15■■■□□ 2.42
SHCBP1Q8NEM2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
SHCBP1Q8NEM2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.14■■■□□ 2.42
SHCBP1Q8NEM2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.14■■■□□ 2.42
SHCBP1Q8NEM2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
SHCBP1Q8NEM2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SHCBP1Q8NEM2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SHCBP1Q8NEM2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SHCBP1Q8NEM2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.12■■■□□ 2.41
SHCBP1Q8NEM2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.12■■■□□ 2.41
SHCBP1Q8NEM2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SHCBP1Q8NEM2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.11■■■□□ 2.41
SHCBP1Q8NEM2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.11■■■□□ 2.41
SHCBP1Q8NEM2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SHCBP1Q8NEM2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SHCBP1Q8NEM2 LINC00273-201ENST00000539813 1452 ntBASIC30.1■■■□□ 2.41
SHCBP1Q8NEM2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.1■■■□□ 2.41
SHCBP1Q8NEM2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.1■■■□□ 2.41
SHCBP1Q8NEM2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SHCBP1Q8NEM2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.08■■■□□ 2.41
SHCBP1Q8NEM2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.08■■■□□ 2.41
SHCBP1Q8NEM2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.07■■■□□ 2.4
SHCBP1Q8NEM2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.07■■■□□ 2.4
SHCBP1Q8NEM2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SHCBP1Q8NEM2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SHCBP1Q8NEM2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
SHCBP1Q8NEM2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.05■■■□□ 2.4
SHCBP1Q8NEM2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.05■■■□□ 2.4
SHCBP1Q8NEM2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.05■■■□□ 2.4
SHCBP1Q8NEM2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.05■■■□□ 2.4
SHCBP1Q8NEM2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SHCBP1Q8NEM2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
SHCBP1Q8NEM2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.04■■■□□ 2.4
SHCBP1Q8NEM2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.04■■■□□ 2.4
SHCBP1Q8NEM2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.04■■■□□ 2.4
SHCBP1Q8NEM2 AC010864.1-201ENST00000609407 1511 ntBASIC30.04■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms