Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM116Q8NCL8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM116Q8NCL8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM116Q8NCL8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM116Q8NCL8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM116Q8NCL8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM116Q8NCL8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM116Q8NCL8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TMEM116Q8NCL8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM116Q8NCL8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM116Q8NCL8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TMEM116Q8NCL8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM116Q8NCL8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
TMEM116Q8NCL8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM116Q8NCL8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TMEM116Q8NCL8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM116Q8NCL8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM116Q8NCL8 AL139393.2-201ENST00000608721 2025 ntBASIC20.56■□□□□ 0.88
TMEM116Q8NCL8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM116Q8NCL8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM116Q8NCL8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM116Q8NCL8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM116Q8NCL8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM116Q8NCL8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM116Q8NCL8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM116Q8NCL8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM116Q8NCL8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TMEM116Q8NCL8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM116Q8NCL8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM116Q8NCL8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM116Q8NCL8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TMEM116Q8NCL8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM116Q8NCL8 AC010864.1-201ENST00000609407 1511 ntBASIC20.52■□□□□ 0.87
TMEM116Q8NCL8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM116Q8NCL8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM116Q8NCL8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM116Q8NCL8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM116Q8NCL8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TMEM116Q8NCL8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.5■□□□□ 0.87
TMEM116Q8NCL8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TMEM116Q8NCL8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.5■□□□□ 0.87
TMEM116Q8NCL8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.5■□□□□ 0.87
TMEM116Q8NCL8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
TMEM116Q8NCL8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TMEM116Q8NCL8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM116Q8NCL8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM116Q8NCL8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM116Q8NCL8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.49■□□□□ 0.87
TMEM116Q8NCL8 AC097358.2-201ENST00000607541 1159 ntBASIC20.49■□□□□ 0.87
TMEM116Q8NCL8 AC142086.6-201ENST00000621154 1765 ntBASIC20.49■□□□□ 0.87
TMEM116Q8NCL8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM116Q8NCL8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM116Q8NCL8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM116Q8NCL8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM116Q8NCL8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.47■□□□□ 0.87
TMEM116Q8NCL8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM116Q8NCL8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.47■□□□□ 0.87
TMEM116Q8NCL8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM116Q8NCL8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TMEM116Q8NCL8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM116Q8NCL8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.46■□□□□ 0.87
TMEM116Q8NCL8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TMEM116Q8NCL8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TMEM116Q8NCL8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
TMEM116Q8NCL8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM116Q8NCL8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM116Q8NCL8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TMEM116Q8NCL8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TMEM116Q8NCL8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
TMEM116Q8NCL8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM116Q8NCL8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TMEM116Q8NCL8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM116Q8NCL8 AC136428.2-201ENST00000563187 214 ntBASIC20.43■□□□□ 0.86
TMEM116Q8NCL8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.43■□□□□ 0.86
TMEM116Q8NCL8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM116Q8NCL8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM116Q8NCL8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM116Q8NCL8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM116Q8NCL8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.42■□□□□ 0.86
TMEM116Q8NCL8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.41■□□□□ 0.86
TMEM116Q8NCL8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM116Q8NCL8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.41■□□□□ 0.86
TMEM116Q8NCL8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM116Q8NCL8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM116Q8NCL8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM116Q8NCL8 AL391121.1-201ENST00000607967 1349 ntBASIC20.39■□□□□ 0.85
TMEM116Q8NCL8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM116Q8NCL8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.39■□□□□ 0.85
TMEM116Q8NCL8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.39■□□□□ 0.85
TMEM116Q8NCL8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM116Q8NCL8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM116Q8NCL8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM116Q8NCL8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TMEM116Q8NCL8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.38■□□□□ 0.85
TMEM116Q8NCL8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.38■□□□□ 0.85
TMEM116Q8NCL8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM116Q8NCL8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM116Q8NCL8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM116Q8NCL8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
TMEM116Q8NCL8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms