Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
VPS36Q86VN1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
VPS36Q86VN1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.1
VPS36Q86VN1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
VPS36Q86VN1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.13■■■□□ 2.09
VPS36Q86VN1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
VPS36Q86VN1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
VPS36Q86VN1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
VPS36Q86VN1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
VPS36Q86VN1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
VPS36Q86VN1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
VPS36Q86VN1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
VPS36Q86VN1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
VPS36Q86VN1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
VPS36Q86VN1 AC010864.1-201ENST00000609407 1511 ntBASIC28.09■■■□□ 2.09
VPS36Q86VN1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
VPS36Q86VN1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.08■■■□□ 2.09
VPS36Q86VN1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.08■■■□□ 2.09
VPS36Q86VN1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.08■■■□□ 2.09
VPS36Q86VN1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.08■■■□□ 2.09
VPS36Q86VN1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
VPS36Q86VN1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
VPS36Q86VN1 AL139393.2-201ENST00000608721 2025 ntBASIC28.08■■■□□ 2.08
VPS36Q86VN1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
VPS36Q86VN1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
VPS36Q86VN1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
VPS36Q86VN1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.07■■■□□ 2.08
VPS36Q86VN1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
VPS36Q86VN1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
VPS36Q86VN1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
VPS36Q86VN1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
VPS36Q86VN1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
VPS36Q86VN1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
VPS36Q86VN1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
VPS36Q86VN1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
VPS36Q86VN1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
VPS36Q86VN1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
VPS36Q86VN1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
VPS36Q86VN1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
VPS36Q86VN1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
VPS36Q86VN1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.02■■■□□ 2.08
VPS36Q86VN1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
VPS36Q86VN1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.01■■■□□ 2.07
VPS36Q86VN1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
VPS36Q86VN1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
VPS36Q86VN1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
VPS36Q86VN1 AC142086.6-201ENST00000621154 1765 ntBASIC27.98■■■□□ 2.07
VPS36Q86VN1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
VPS36Q86VN1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
VPS36Q86VN1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
VPS36Q86VN1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
VPS36Q86VN1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.97■■■□□ 2.07
VPS36Q86VN1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
VPS36Q86VN1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.96■■■□□ 2.07
VPS36Q86VN1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
VPS36Q86VN1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.95■■■□□ 2.07
VPS36Q86VN1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.95■■■□□ 2.06
VPS36Q86VN1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.94■■■□□ 2.06
VPS36Q86VN1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.93■■■□□ 2.06
VPS36Q86VN1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
VPS36Q86VN1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.93■■■□□ 2.06
VPS36Q86VN1 AC097358.2-201ENST00000607541 1159 ntBASIC27.93■■■□□ 2.06
VPS36Q86VN1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
VPS36Q86VN1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.92■■■□□ 2.06
VPS36Q86VN1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.91■■■□□ 2.06
VPS36Q86VN1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.91■■■□□ 2.06
VPS36Q86VN1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
VPS36Q86VN1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
VPS36Q86VN1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
VPS36Q86VN1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
VPS36Q86VN1 AL391121.1-201ENST00000607967 1349 ntBASIC27.9■■■□□ 2.06
VPS36Q86VN1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
VPS36Q86VN1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.89■■■□□ 2.06
VPS36Q86VN1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
VPS36Q86VN1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
VPS36Q86VN1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
VPS36Q86VN1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
VPS36Q86VN1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
VPS36Q86VN1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.88■■■□□ 2.05
VPS36Q86VN1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.88■■■□□ 2.05
VPS36Q86VN1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.88■■■□□ 2.05
VPS36Q86VN1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
VPS36Q86VN1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.87■■■□□ 2.05
VPS36Q86VN1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
VPS36Q86VN1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
VPS36Q86VN1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
VPS36Q86VN1 AC136428.2-201ENST00000563187 214 ntBASIC27.85■■■□□ 2.05
VPS36Q86VN1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
VPS36Q86VN1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.84■■■□□ 2.05
VPS36Q86VN1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
VPS36Q86VN1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.82■■■□□ 2.04
VPS36Q86VN1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
VPS36Q86VN1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
VPS36Q86VN1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.82■■■□□ 2.04
VPS36Q86VN1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
VPS36Q86VN1 DRD5P2-201ENST00000421395 2012 ntBASIC27.82■■■□□ 2.04
VPS36Q86VN1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.81■■■□□ 2.04
VPS36Q86VN1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
VPS36Q86VN1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.81■■■□□ 2.04
VPS36Q86VN1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms