Protein–RNA interactions for Protein: Q06688

BER1, SRR1-like protein BER1, yeastyeast

Known RBP Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BER1Q06688 NUC1YJL208C 990 nt7.54□□□□□ -1.2
BER1Q06688 RAS2YNL098C 969 nt7.54□□□□□ -1.2
BER1Q06688 FCY21YER060W 1587 nt7.54□□□□□ -1.2
BER1Q06688 CSM1YCR086W 573 nt7.53□□□□□ -1.2
BER1Q06688 LEU4YNL104C 1860 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)BtD(GUC)B 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)DtD(GUC)D 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)G1tD(GUC)G1 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)G2tD(GUC)G2 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)I1tD(GUC)I1 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)I2tD(GUC)I2 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)J1tD(GUC)J1 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)J2tD(GUC)J2 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)J3tD(GUC)J3 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)J4tD(GUC)J4 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)KtD(GUC)K 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)L1tD(GUC)L1 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)L2tD(GUC)L2 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)MtD(GUC)M 72 nt7.52□□□□□ -1.21
BER1Q06688 tD(GUC)OtD(GUC)O 72 nt7.52□□□□□ -1.21
BER1Q06688 YDR455CYDR455C 309 nt7.52□□□□□ -1.21
BER1Q06688 MIM1YOL026C 342 nt7.52□□□□□ -1.21
BER1Q06688 SNX3YOR357C 489 nt7.52□□□□□ -1.21
BER1Q06688 SFL1YOR140W 2301 nt7.52□□□□□ -1.21
BER1Q06688 MDL2YPL270W 2322 nt7.52□□□□□ -1.21
BER1Q06688 ALR1YOL130W 2580 nt7.52□□□□□ -1.21
BER1Q06688 MSB4YOL112W 1479 nt7.51□□□□□ -1.21
BER1Q06688 FET5YFL041W 1869 nt7.51□□□□□ -1.21
BER1Q06688 RBG1YAL036C 1110 nt7.5□□□□□ -1.21
BER1Q06688 NSG2YNL156C 900 nt7.5□□□□□ -1.21
BER1Q06688 YGR012WYGR012W 1182 nt7.47□□□□□ -1.21
BER1Q06688 SDH5YOL071W 489 nt7.47□□□□□ -1.21
BER1Q06688 NPP2YEL016C 1482 nt7.47□□□□□ -1.21
BER1Q06688 HBS1YKR084C 1836 nt7.47□□□□□ -1.21
BER1Q06688 EAF3YPR023C 1206 nt7.46□□□□□ -1.22
BER1Q06688 LSB5YCL034W 1065 nt7.46□□□□□ -1.22
BER1Q06688 LSM5YER146W 282 nt7.45□□□□□ -1.22
BER1Q06688 SAC7YDR389W 1965 nt7.44□□□□□ -1.22
BER1Q06688 ERG13YML126C 1476 nt7.44□□□□□ -1.22
BER1Q06688 DAK2YFL053W 1776 nt7.44□□□□□ -1.22
BER1Q06688 SAM3YPL274W 1764 nt7.44□□□□□ -1.22
BER1Q06688 tE(CUC)DtE(CUC)D 72 nt7.43□□□□□ -1.22
BER1Q06688 tE(CUC)ItE(CUC)I 72 nt7.43□□□□□ -1.22
BER1Q06688 PRY1YJL079C 900 nt7.43□□□□□ -1.22
BER1Q06688 YPL222C-AYPL222C-A 246 nt7.43□□□□□ -1.22
BER1Q06688 OYE2YHR179W 1203 nt7.42□□□□□ -1.22
BER1Q06688 GND1YHR183W 1470 nt7.42□□□□□ -1.22
BER1Q06688 YDR467CYDR467C 327 nt7.41□□□□□ -1.22
BER1Q06688 DUR3YHL016C 2208 nt7.41□□□□□ -1.22
BER1Q06688 RAD23YEL037C 1197 nt7.4□□□□□ -1.22
BER1Q06688 RPT5YOR117W 1305 nt7.4□□□□□ -1.22
BER1Q06688 YMR265CYMR265C 1386 nt7.4□□□□□ -1.22
BER1Q06688 YLR173WYLR173W 1827 nt7.4□□□□□ -1.23
BER1Q06688 GNP1YDR508C 1992 nt7.39□□□□□ -1.23
BER1Q06688 LOT5YKL183W 921 nt7.39□□□□□ -1.23
BER1Q06688 RTG2YGL252C 1767 nt7.38□□□□□ -1.23
BER1Q06688 FIT1YDR534C 1587 nt7.38□□□□□ -1.23
BER1Q06688 TRP2YER090W 1524 nt7.38□□□□□ -1.23
BER1Q06688 UFD1YGR048W 1086 nt7.38□□□□□ -1.23
BER1Q06688 LPD1YFL018C 1500 nt7.37□□□□□ -1.23
BER1Q06688 TPS1YBR126C 1488 nt7.37□□□□□ -1.23
BER1Q06688 PUS7YOR243C 2031 nt7.37□□□□□ -1.23
BER1Q06688 DDI1YER143W 1287 nt7.37□□□□□ -1.23
BER1Q06688 ORT1YOR130C 879 nt7.37□□□□□ -1.23
BER1Q06688 HXT11YOL156W 1704 nt7.36□□□□□ -1.23
BER1Q06688 ELO1YJL196C 933 nt7.36□□□□□ -1.23
BER1Q06688 HAP5YOR358W 729 nt7.36□□□□□ -1.23
BER1Q06688 THI6YPL214C 1623 nt7.35□□□□□ -1.23
BER1Q06688 SMM1YNR015W 1155 nt7.35□□□□□ -1.23
BER1Q06688 RRT8YOL048C 1029 nt7.35□□□□□ -1.23
BER1Q06688 RPN14YGL004C 1254 nt7.34□□□□□ -1.23
BER1Q06688 YJL118WYJL118W 660 nt7.34□□□□□ -1.23
BER1Q06688 TMA23YMR269W 636 nt7.33□□□□□ -1.24
BER1Q06688 SUV3YPL029W 2214 nt7.33□□□□□ -1.24
BER1Q06688 DUS3YLR401C 2007 nt7.32□□□□□ -1.24
BER1Q06688 YNR064CYNR064C 873 nt7.32□□□□□ -1.24
BER1Q06688 RIB7YBR153W 735 nt7.32□□□□□ -1.24
BER1Q06688 snR4snR4 186 nt7.31□□□□□ -1.24
BER1Q06688 GPM1YKL152C 744 nt7.3□□□□□ -1.24
BER1Q06688 EMC3YKL207W 762 nt7.3□□□□□ -1.24
BER1Q06688 YBL095WYBL095W 813 nt7.3□□□□□ -1.24
BER1Q06688 Q0010Q0010 387 nt7.3□□□□□ -1.24
BER1Q06688 KEL3YPL263C 1956 nt7.29□□□□□ -1.24
BER1Q06688 POP2YNR052C 1302 nt7.29□□□□□ -1.24
BER1Q06688 SRM1YGL097W 1449 nt7.29□□□□□ -1.24
BER1Q06688 RIB3YDR487C 627 nt7.29□□□□□ -1.24
BER1Q06688 IMO32YGR031W 1029 nt7.29□□□□□ -1.24
BER1Q06688 AAT1YKL106W 1356 nt7.28□□□□□ -1.24
BER1Q06688 ADE16YLR028C 1776 nt7.28□□□□□ -1.24
BER1Q06688 YJR114WYJR114W 393 nt7.27□□□□□ -1.25
BER1Q06688 YLR111WYLR111W 333 nt7.27□□□□□ -1.25
BER1Q06688 GCD11YER025W 1584 nt7.26□□□□□ -1.25
BER1Q06688 CRC1YOR100C 984 nt7.26□□□□□ -1.25
BER1Q06688 YJL055WYJL055W 738 nt7.25□□□□□ -1.25
BER1Q06688 snR31snR31 225 nt7.25□□□□□ -1.25
BER1Q06688 LSB3YFR024C-A 1380 nt7.24□□□□□ -1.25
BER1Q06688 YMR210WYMR210W 1350 nt7.24□□□□□ -1.25
BER1Q06688 FTH1YBR207W 1398 nt7.24□□□□□ -1.25
BER1Q06688 YMC2YBR104W 990 nt7.24□□□□□ -1.25
BER1Q06688 HXT12YIL170W 1374 nt7.23□□□□□ -1.25
Retrieved 100 of 7,029 protein–RNA pairs in 11.3 ms