Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 CTI6YPL181W 1521 nt8.73□□□□□ -1.01
VTA1Q06263 POT1YIL160C 1254 nt8.72□□□□□ -1.01
VTA1Q06263 BET2YPR176C 978 nt8.72□□□□□ -1.01
VTA1Q06263 ENT4YLL038C 744 nt8.71□□□□□ -1.02
VTA1Q06263 URA8YJR103W 1737 nt8.7□□□□□ -1.02
VTA1Q06263 YDR455CYDR455C 309 nt8.69□□□□□ -1.02
VTA1Q06263 GSF2YML048W 1212 nt8.69□□□□□ -1.02
VTA1Q06263 DIG1YPL049C 1359 nt8.69□□□□□ -1.02
VTA1Q06263 QDR2YIL121W 1629 nt8.69□□□□□ -1.02
VTA1Q06263 STP3YLR375W 1032 nt8.68□□□□□ -1.02
VTA1Q06263 YMR262WYMR262W 942 nt8.68□□□□□ -1.02
VTA1Q06263 ZAP1YJL056C 2643 nt8.68□□□□□ -1.02
VTA1Q06263 AIM1YAL046C 357 nt8.67□□□□□ -1.02
VTA1Q06263 ERG13YML126C 1476 nt8.67□□□□□ -1.02
VTA1Q06263 PSD1YNL169C 1503 nt8.66□□□□□ -1.02
VTA1Q06263 ADE8YDR408C 645 nt8.66□□□□□ -1.02
VTA1Q06263 PAU5YFL020C 369 nt8.66□□□□□ -1.02
VTA1Q06263 SPS100YHR139C 981 nt8.66□□□□□ -1.02
VTA1Q06263 PGC1YPL206C 966 nt8.66□□□□□ -1.02
VTA1Q06263 HXK1YFR053C 1458 nt8.64□□□□□ -1.03
VTA1Q06263 TUB4YLR212C 1422 nt8.63□□□□□ -1.03
VTA1Q06263 CYT1YOR065W 930 nt8.63□□□□□ -1.03
VTA1Q06263 YJR114WYJR114W 393 nt8.62□□□□□ -1.03
VTA1Q06263 YBR232CYBR232C 360 nt8.62□□□□□ -1.03
VTA1Q06263 TVP23YDR084C 600 nt8.61□□□□□ -1.03
VTA1Q06263 YLR046CYLR046C 813 nt8.61□□□□□ -1.03
VTA1Q06263 PAR32YDL173W 888 nt8.6□□□□□ -1.03
VTA1Q06263 YFR036W-AYFR036W-A 651 nt8.6□□□□□ -1.03
VTA1Q06263 ILV2YMR108W 2064 nt8.6□□□□□ -1.03
VTA1Q06263 GID8YMR135C 1368 nt8.6□□□□□ -1.03
VTA1Q06263 YDR510C-AYDR510C-A 117 nt8.59□□□□□ -1.03
VTA1Q06263 ALD5YER073W 1563 nt8.59□□□□□ -1.03
VTA1Q06263 ESBP6YNL125C 2022 nt8.58□□□□□ -1.04
VTA1Q06263 NAP1YKR048C 1254 nt8.57□□□□□ -1.04
VTA1Q06263 ABZ2YMR289W 1125 nt8.57□□□□□ -1.04
VTA1Q06263 YRF1-2YER190W 5046 nt8.57□□□□□ -1.04
VTA1Q06263 SAC7YDR389W 1965 nt8.56□□□□□ -1.04
VTA1Q06263 NIF3YGL221C 867 nt8.56□□□□□ -1.04
VTA1Q06263 SEN2YLR105C 1134 nt8.56□□□□□ -1.04
VTA1Q06263 APS2YJR058C 444 nt8.55□□□□□ -1.04
VTA1Q06263 OPI3YJR073C 621 nt8.55□□□□□ -1.04
VTA1Q06263 MRS6YOR370C 1812 nt8.54□□□□□ -1.04
VTA1Q06263 YNR064CYNR064C 873 nt8.54□□□□□ -1.04
VTA1Q06263 YHR219WYHR219W 1875 nt8.53□□□□□ -1.04
VTA1Q06263 YKL133CYKL133C 1392 nt8.53□□□□□ -1.04
VTA1Q06263 SSL2YIL143C 2532 nt8.52□□□□□ -1.04
VTA1Q06263 DLD3YEL071W 1491 nt8.52□□□□□ -1.05
VTA1Q06263 ODC1YPL134C 933 nt8.52□□□□□ -1.05
VTA1Q06263 DMA2YNL116W 1569 nt8.51□□□□□ -1.05
VTA1Q06263 CWP2YKL096W-A 279 nt8.5□□□□□ -1.05
VTA1Q06263 GTB1YDR221W 2109 nt8.48□□□□□ -1.05
VTA1Q06263 AMF1YOR378W 1548 nt8.48□□□□□ -1.05
VTA1Q06263 ENO2YHR174W 1314 nt8.48□□□□□ -1.05
VTA1Q06263 PCP1YGR101W 1041 nt8.47□□□□□ -1.05
VTA1Q06263 KRE1YNL322C 942 nt8.47□□□□□ -1.05
VTA1Q06263 KEL3YPL263C 1956 nt8.47□□□□□ -1.05
VTA1Q06263 YJL064WYJL064W 396 nt8.46□□□□□ -1.06
VTA1Q06263 VMA11YPL234C 495 nt8.46□□□□□ -1.06
VTA1Q06263 ITR2YOL103W 1830 nt8.45□□□□□ -1.06
VTA1Q06263 IGD1YFR017C 588 nt8.45□□□□□ -1.06
VTA1Q06263 FSH2YMR222C 672 nt8.45□□□□□ -1.06
VTA1Q06263 PAU19YMR325W 375 nt8.45□□□□□ -1.06
VTA1Q06263 LSR1LSR1 1175 nt8.44□□□□□ -1.06
VTA1Q06263 RPD3YNL330C 1302 nt8.44□□□□□ -1.06
VTA1Q06263 MAS1YLR163C 1389 nt8.44□□□□□ -1.06
VTA1Q06263 RPN14YGL004C 1254 nt8.43□□□□□ -1.06
VTA1Q06263 ELO1YJL196C 933 nt8.43□□□□□ -1.06
VTA1Q06263 YOR072WYOR072W 315 nt8.43□□□□□ -1.06
VTA1Q06263 TIP1YBR067C 633 nt8.43□□□□□ -1.06
VTA1Q06263 snR31snR31 225 nt8.43□□□□□ -1.06
VTA1Q06263 THP3YPR045C 1413 nt8.43□□□□□ -1.06
VTA1Q06263 DTR1YBR180W 1719 nt8.43□□□□□ -1.06
VTA1Q06263 MDM35YKL053C-A 261 nt8.42□□□□□ -1.06
VTA1Q06263 LEU2YCL018W 1095 nt8.42□□□□□ -1.06
VTA1Q06263 GAL2YLR081W 1725 nt8.41□□□□□ -1.06
VTA1Q06263 YMR265CYMR265C 1386 nt8.41□□□□□ -1.06
VTA1Q06263 PUP1YOR157C 786 nt8.41□□□□□ -1.06
VTA1Q06263 HAP5YOR358W 729 nt8.41□□□□□ -1.06
VTA1Q06263 TPC1YGR096W 945 nt8.4□□□□□ -1.06
VTA1Q06263 SWT21YNL187W 1074 nt8.4□□□□□ -1.06
VTA1Q06263 YHR218WYHR218W 1812 nt8.39□□□□□ -1.07
VTA1Q06263 KRR1YCL059C 951 nt8.39□□□□□ -1.07
VTA1Q06263 NAS2YIL007C 663 nt8.39□□□□□ -1.07
VTA1Q06263 TIM44YIL022W 1296 nt8.38□□□□□ -1.07
VTA1Q06263 CDD1YLR245C 429 nt8.38□□□□□ -1.07
VTA1Q06263 SPE2YOL052C 1191 nt8.38□□□□□ -1.07
VTA1Q06263 SUV3YPL029W 2214 nt8.38□□□□□ -1.07
VTA1Q06263 SNX3YOR357C 489 nt8.36□□□□□ -1.07
VTA1Q06263 RFC1YOR217W 2586 nt8.35□□□□□ -1.07
VTA1Q06263 SFL1YOR140W 2301 nt8.35□□□□□ -1.07
VTA1Q06263 MET1YKR069W 1782 nt8.33□□□□□ -1.08
VTA1Q06263 NAM8YHR086W 1572 nt8.33□□□□□ -1.08
VTA1Q06263 RPC31YNL151C 756 nt8.33□□□□□ -1.08
VTA1Q06263 IPL1YPL209C 1104 nt8.33□□□□□ -1.08
VTA1Q06263 tA(AGC)DtA(AGC)D 73 nt8.32□□□□□ -1.08
VTA1Q06263 tA(AGC)FtA(AGC)F 73 nt8.32□□□□□ -1.08
VTA1Q06263 tA(AGC)GtA(AGC)G 73 nt8.32□□□□□ -1.08
VTA1Q06263 tA(AGC)HtA(AGC)H 73 nt8.32□□□□□ -1.08
VTA1Q06263 tA(AGC)JtA(AGC)J 73 nt8.32□□□□□ -1.08
VTA1Q06263 tA(AGC)K1tA(AGC)K1 73 nt8.32□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 11.3 ms