Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RPP38P78345 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RPP38P78345 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.64■■□□□ 1.54
RPP38P78345 MIR3665-201ENST00000578708 105 ntBASIC24.64■■□□□ 1.54
RPP38P78345 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RPP38P78345 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.63■■□□□ 1.53
RPP38P78345 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.63■■□□□ 1.53
RPP38P78345 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
RPP38P78345 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RPP38P78345 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RPP38P78345 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RPP38P78345 AC005559.1-201ENST00000589661 871 ntBASIC24.61■■□□□ 1.53
RPP38P78345 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
RPP38P78345 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RPP38P78345 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
RPP38P78345 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RPP38P78345 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RPP38P78345 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.6■■□□□ 1.53
RPP38P78345 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
RPP38P78345 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RPP38P78345 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.58■■□□□ 1.53
RPP38P78345 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RPP38P78345 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RPP38P78345 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
RPP38P78345 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
RPP38P78345 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
RPP38P78345 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPP38P78345 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RPP38P78345 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.55■■□□□ 1.52
RPP38P78345 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RPP38P78345 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RPP38P78345 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RPP38P78345 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
RPP38P78345 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.54■■□□□ 1.52
RPP38P78345 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
RPP38P78345 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.53■■□□□ 1.52
RPP38P78345 AL162393.1-201ENST00000437852 946 ntBASIC24.53■■□□□ 1.52
RPP38P78345 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.53■■□□□ 1.52
RPP38P78345 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.53■■□□□ 1.52
RPP38P78345 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RPP38P78345 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPP38P78345 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RPP38P78345 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPP38P78345 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RPP38P78345 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
RPP38P78345 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RPP38P78345 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
RPP38P78345 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPP38P78345 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPP38P78345 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.51■■□□□ 1.51
RPP38P78345 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RPP38P78345 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.51■■□□□ 1.51
RPP38P78345 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.5■■□□□ 1.51
RPP38P78345 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RPP38P78345 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RPP38P78345 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RPP38P78345 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPP38P78345 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RPP38P78345 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RPP38P78345 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RPP38P78345 DUX4L28-201ENST00000623687 678 ntBASIC24.48■■□□□ 1.51
RPP38P78345 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RPP38P78345 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RPP38P78345 RPS2P35-201ENST00000443417 897 ntBASIC24.47■■□□□ 1.51
RPP38P78345 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.47■■□□□ 1.51
RPP38P78345 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.47■■□□□ 1.51
RPP38P78345 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RPP38P78345 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RPP38P78345 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RPP38P78345 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.46■■□□□ 1.51
RPP38P78345 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RPP38P78345 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.45■■□□□ 1.5
RPP38P78345 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RPP38P78345 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RPP38P78345 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RPP38P78345 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
RPP38P78345 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RPP38P78345 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.44■■□□□ 1.5
RPP38P78345 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RPP38P78345 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RPP38P78345 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RPP38P78345 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RPP38P78345 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RPP38P78345 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.42■■□□□ 1.5
RPP38P78345 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RPP38P78345 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RPP38P78345 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RPP38P78345 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RPP38P78345 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.41■■□□□ 1.5
RPP38P78345 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.41■■□□□ 1.5
RPP38P78345 AC044849.2-201ENST00000606596 710 ntBASIC24.41■■□□□ 1.5
RPP38P78345 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RPP38P78345 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RPP38P78345 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
RPP38P78345 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RPP38P78345 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.4■■□□□ 1.5
RPP38P78345 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RPP38P78345 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
RPP38P78345 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RPP38P78345 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms