Protein–RNA interactions for Protein: P53078

SDT1, Suppressor of disruption of TFIIS, yeastyeast

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDT1P53078 tS(GCU)LtS(GCU)L 80 nt8.33□□□□□ -1.08
SDT1P53078 SPS100YHR139C 981 nt8.33□□□□□ -1.08
SDT1P53078 GSF2YML048W 1212 nt8.33□□□□□ -1.08
SDT1P53078 ESS1YJR017C 513 nt8.32□□□□□ -1.08
SDT1P53078 YJR114WYJR114W 393 nt8.32□□□□□ -1.08
SDT1P53078 YMR262WYMR262W 942 nt8.32□□□□□ -1.08
SDT1P53078 TVP23YDR084C 600 nt8.3□□□□□ -1.08
SDT1P53078 SGA1YIL099W 1650 nt8.3□□□□□ -1.08
SDT1P53078 YFR036W-AYFR036W-A 651 nt8.29□□□□□ -1.08
SDT1P53078 STP3YLR375W 1032 nt8.29□□□□□ -1.08
SDT1P53078 PAU5YFL020C 369 nt8.28□□□□□ -1.08
SDT1P53078 SAC7YDR389W 1965 nt8.28□□□□□ -1.08
SDT1P53078 YNR064CYNR064C 873 nt8.27□□□□□ -1.09
SDT1P53078 TUB4YLR212C 1422 nt8.27□□□□□ -1.09
SDT1P53078 YRF1-2YER190W 5046 nt8.27□□□□□ -1.09
SDT1P53078 DLD3YEL071W 1491 nt8.26□□□□□ -1.09
SDT1P53078 GID8YMR135C 1368 nt8.26□□□□□ -1.09
SDT1P53078 ABZ2YMR289W 1125 nt8.26□□□□□ -1.09
SDT1P53078 PGC1YPL206C 966 nt8.26□□□□□ -1.09
SDT1P53078 SFP1YLR403W 2052 nt8.25□□□□□ -1.09
SDT1P53078 OPI3YJR073C 621 nt8.24□□□□□ -1.09
SDT1P53078 PAR32YDL173W 888 nt8.23□□□□□ -1.09
SDT1P53078 PSD1YNL169C 1503 nt8.23□□□□□ -1.09
SDT1P53078 YBR232CYBR232C 360 nt8.22□□□□□ -1.09
SDT1P53078 YKL133CYKL133C 1392 nt8.22□□□□□ -1.09
SDT1P53078 ZAP1YJL056C 2643 nt8.21□□□□□ -1.09
SDT1P53078 VMA11YPL234C 495 nt8.21□□□□□ -1.1
SDT1P53078 ITR2YOL103W 1830 nt8.2□□□□□ -1.1
SDT1P53078 NIF3YGL221C 867 nt8.2□□□□□ -1.1
SDT1P53078 APS2YJR058C 444 nt8.2□□□□□ -1.1
SDT1P53078 ENO2YHR174W 1314 nt8.2□□□□□ -1.1
SDT1P53078 YHR219WYHR219W 1875 nt8.19□□□□□ -1.1
SDT1P53078 KEL3YPL263C 1956 nt8.19□□□□□ -1.1
SDT1P53078 TIP1YBR067C 633 nt8.19□□□□□ -1.1
SDT1P53078 MRS6YOR370C 1812 nt8.19□□□□□ -1.1
SDT1P53078 YHL008CYHL008C 1884 nt8.19□□□□□ -1.1
SDT1P53078 AMF1YOR378W 1548 nt8.19□□□□□ -1.1
SDT1P53078 RPD3YNL330C 1302 nt8.18□□□□□ -1.1
SDT1P53078 FRE6YLL051C 2139 nt8.18□□□□□ -1.1
SDT1P53078 RPN14YGL004C 1254 nt8.17□□□□□ -1.1
SDT1P53078 PCP1YGR101W 1041 nt8.17□□□□□ -1.1
SDT1P53078 ELO1YJL196C 933 nt8.17□□□□□ -1.1
SDT1P53078 KRE1YNL322C 942 nt8.17□□□□□ -1.1
SDT1P53078 CYT1YOR065W 930 nt8.16□□□□□ -1.1
SDT1P53078 DMA2YNL116W 1569 nt8.15□□□□□ -1.1
SDT1P53078 YMR265CYMR265C 1386 nt8.15□□□□□ -1.1
SDT1P53078 SEN2YLR105C 1134 nt8.15□□□□□ -1.1
SDT1P53078 LSR1LSR1 1175 nt8.15□□□□□ -1.1
SDT1P53078 HAP5YOR358W 729 nt8.15□□□□□ -1.1
SDT1P53078 snR31snR31 225 nt8.15□□□□□ -1.1
SDT1P53078 TPO4YOR273C 1980 nt8.14□□□□□ -1.11
SDT1P53078 KRR1YCL059C 951 nt8.14□□□□□ -1.11
SDT1P53078 CWP2YKL096W-A 279 nt8.14□□□□□ -1.11
SDT1P53078 NAP1YKR048C 1254 nt8.14□□□□□ -1.11
SDT1P53078 HMG2YLR450W 3138 nt8.12□□□□□ -1.11
SDT1P53078 FSH2YMR222C 672 nt8.12□□□□□ -1.11
SDT1P53078 SWT21YNL187W 1074 nt8.12□□□□□ -1.11
SDT1P53078 SNX3YOR357C 489 nt8.12□□□□□ -1.11
SDT1P53078 LEU2YCL018W 1095 nt8.11□□□□□ -1.11
SDT1P53078 SUV3YPL029W 2214 nt8.11□□□□□ -1.11
SDT1P53078 SSL2YIL143C 2532 nt8.1□□□□□ -1.11
SDT1P53078 IGD1YFR017C 588 nt8.1□□□□□ -1.11
SDT1P53078 TPC1YGR096W 945 nt8.1□□□□□ -1.11
SDT1P53078 TIM44YIL022W 1296 nt8.1□□□□□ -1.11
SDT1P53078 THP3YPR045C 1413 nt8.1□□□□□ -1.11
SDT1P53078 SPE2YOL052C 1191 nt8.09□□□□□ -1.11
SDT1P53078 ODC1YPL134C 933 nt8.08□□□□□ -1.12
SDT1P53078 SFL1YOR140W 2301 nt8.08□□□□□ -1.12
SDT1P53078 NAS2YIL007C 663 nt8.06□□□□□ -1.12
SDT1P53078 YJL064WYJL064W 396 nt8.06□□□□□ -1.12
SDT1P53078 MET1YKR069W 1782 nt8.06□□□□□ -1.12
SDT1P53078 YHR218WYHR218W 1812 nt8.06□□□□□ -1.12
SDT1P53078 PAU19YMR325W 375 nt8.05□□□□□ -1.12
SDT1P53078 RPC31YNL151C 756 nt8.05□□□□□ -1.12
SDT1P53078 CRC1YOR100C 984 nt8.05□□□□□ -1.12
SDT1P53078 NAM8YHR086W 1572 nt8.04□□□□□ -1.12
SDT1P53078 MDM35YKL053C-A 261 nt8.03□□□□□ -1.12
SDT1P53078 NPP1YCR026C 2229 nt8.02□□□□□ -1.13
SDT1P53078 CDD1YLR245C 429 nt8.02□□□□□ -1.13
SDT1P53078 REX2YLR059C 810 nt8□□□□□ -1.13
SDT1P53078 YRF1-3YGR296W 5580 nt8□□□□□ -1.13
SDT1P53078 YRF1-6YNL339C 5580 nt8□□□□□ -1.13
SDT1P53078 YRF1-7YPL283C 5580 nt8□□□□□ -1.13
SDT1P53078 HXK1YFR053C 1458 nt8□□□□□ -1.13
SDT1P53078 YKL053WYKL053W 375 nt7.99□□□□□ -1.13
SDT1P53078 YKR012CYKR012C 378 nt7.99□□□□□ -1.13
SDT1P53078 RIM2YBR192W 1134 nt7.99□□□□□ -1.13
SDT1P53078 SRP54YPR088C 1626 nt7.99□□□□□ -1.13
SDT1P53078 ALD5YER073W 1563 nt7.98□□□□□ -1.13
SDT1P53078 tA(AGC)DtA(AGC)D 73 nt7.98□□□□□ -1.13
SDT1P53078 tA(AGC)FtA(AGC)F 73 nt7.98□□□□□ -1.13
SDT1P53078 tA(AGC)GtA(AGC)G 73 nt7.98□□□□□ -1.13
SDT1P53078 tA(AGC)HtA(AGC)H 73 nt7.98□□□□□ -1.13
SDT1P53078 tA(AGC)JtA(AGC)J 73 nt7.98□□□□□ -1.13
SDT1P53078 tA(AGC)K1tA(AGC)K1 73 nt7.98□□□□□ -1.13
SDT1P53078 tA(AGC)K2tA(AGC)K2 73 nt7.98□□□□□ -1.13
SDT1P53078 tA(AGC)LtA(AGC)L 73 nt7.98□□□□□ -1.13
SDT1P53078 tA(AGC)M1tA(AGC)M1 73 nt7.98□□□□□ -1.13
SDT1P53078 tA(AGC)M2tA(AGC)M2 73 nt7.98□□□□□ -1.13
SDT1P53078 tA(AGC)PtA(AGC)P 73 nt7.98□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 9.1 ms