Protein–RNA interactions for Protein: P40438

VTH1, VPS10 homolog 1, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH1P40438 YPS3YLR121C 1527 nt13.48□□□□□ -0.25
VTH1P40438 PCP1YGR101W 1041 nt13.45□□□□□ -0.26
VTH1P40438 YDR455CYDR455C 309 nt13.44□□□□□ -0.26
VTH1P40438 PAU21YOR394W 495 nt13.44□□□□□ -0.26
VTH1P40438 PAU22YPL282C 495 nt13.44□□□□□ -0.26
VTH1P40438 SER2YGR208W 930 nt13.43□□□□□ -0.26
VTH1P40438 MOB1YIL106W 945 nt13.43□□□□□ -0.26
VTH1P40438 SPP2YOR148C 558 nt13.43□□□□□ -0.26
VTH1P40438 TAT2YOL020W 1779 nt13.42□□□□□ -0.26
VTH1P40438 YOR343CYOR343C 327 nt13.42□□□□□ -0.26
VTH1P40438 GRH1YDR517W 1119 nt13.41□□□□□ -0.26
VTH1P40438 HEM13YDR044W 987 nt13.4□□□□□ -0.26
VTH1P40438 FMS1YMR020W 1527 nt13.39□□□□□ -0.27
VTH1P40438 RPL12BYDR418W 498 nt13.38□□□□□ -0.27
VTH1P40438 RCR1YBR005W 642 nt13.34□□□□□ -0.27
VTH1P40438 HTS1YPR033C 1641 nt13.34□□□□□ -0.27
VTH1P40438 ERG13YML126C 1476 nt13.34□□□□□ -0.27
VTH1P40438 KAE1YKR038C 1161 nt13.34□□□□□ -0.27
VTH1P40438 ENO2YHR174W 1314 nt13.32□□□□□ -0.28
VTH1P40438 BIO5YNR056C 1686 nt13.32□□□□□ -0.28
VTH1P40438 MFG1YDL233W 1377 nt13.31□□□□□ -0.28
VTH1P40438 BET2YPR176C 978 nt13.31□□□□□ -0.28
VTH1P40438 YAL016C-AYAL016C-A 315 nt13.3□□□□□ -0.28
VTH1P40438 YJL067WYJL067W 351 nt13.29□□□□□ -0.28
VTH1P40438 CWC15YDR163W 528 nt13.26□□□□□ -0.29
VTH1P40438 ZRT3YKL175W 1512 nt13.25□□□□□ -0.29
VTH1P40438 OPI3YJR073C 621 nt13.23□□□□□ -0.29
VTH1P40438 CYC3YAL039C 810 nt13.23□□□□□ -0.29
VTH1P40438 FSH2YMR222C 672 nt13.23□□□□□ -0.29
VTH1P40438 TPC1YGR096W 945 nt13.23□□□□□ -0.29
VTH1P40438 ASP3-1YLR155C 1089 nt13.23□□□□□ -0.29
VTH1P40438 ASP3-2YLR157C 1089 nt13.23□□□□□ -0.29
VTH1P40438 ASP3-3YLR158C 1089 nt13.23□□□□□ -0.29
VTH1P40438 ASP3-4YLR160C 1089 nt13.23□□□□□ -0.29
VTH1P40438 DIG1YPL049C 1359 nt13.23□□□□□ -0.29
VTH1P40438 HRA1HRA1 564 nt13.21□□□□□ -0.29
VTH1P40438 TVP23YDR084C 600 nt13.2□□□□□ -0.3
VTH1P40438 RRT8YOL048C 1029 nt13.2□□□□□ -0.3
VTH1P40438 YOR268CYOR268C 399 nt13.2□□□□□ -0.3
VTH1P40438 ERO1YML130C 1692 nt13.2□□□□□ -0.3
VTH1P40438 HOG1YLR113W 1308 nt13.19□□□□□ -0.3
VTH1P40438 BOR1YNL275W 1731 nt13.19□□□□□ -0.3
VTH1P40438 SRP102YKL154W 735 nt13.18□□□□□ -0.3
VTH1P40438 EMC3YKL207W 762 nt13.18□□□□□ -0.3
VTH1P40438 YKR012CYKR012C 378 nt13.18□□□□□ -0.3
VTH1P40438 YMR206WYMR206W 942 nt13.18□□□□□ -0.3
VTH1P40438 tL(UAA)B1tL(UAA)B1 84 nt13.17□□□□□ -0.3
VTH1P40438 tL(UAA)B2tL(UAA)B2 84 nt13.17□□□□□ -0.3
VTH1P40438 tL(UAA)DtL(UAA)D 84 nt13.17□□□□□ -0.3
VTH1P40438 SUP51tL(UAA)J 84 nt13.17□□□□□ -0.3
VTH1P40438 tL(UAA)KtL(UAA)K 84 nt13.17□□□□□ -0.3
VTH1P40438 tL(UAA)LtL(UAA)L 84 nt13.17□□□□□ -0.3
VTH1P40438 tL(UAA)NtL(UAA)N 84 nt13.17□□□□□ -0.3
VTH1P40438 ACH1YBL015W 1581 nt13.16□□□□□ -0.3
VTH1P40438 YGR210CYGR210C 1236 nt13.13□□□□□ -0.31
VTH1P40438 PAC11YDR488C 1602 nt13.13□□□□□ -0.31
VTH1P40438 AIM1YAL046C 357 nt13.13□□□□□ -0.31
VTH1P40438 YNR064CYNR064C 873 nt13.13□□□□□ -0.31
VTH1P40438 SDS24YBR214W 1584 nt13.12□□□□□ -0.31
VTH1P40438 NAM8YHR086W 1572 nt13.12□□□□□ -0.31
VTH1P40438 YJL160CYJL160C 864 nt13.11□□□□□ -0.31
VTH1P40438 AMF1YOR378W 1548 nt13.11□□□□□ -0.31
VTH1P40438 EDC2YER035W 438 nt13.09□□□□□ -0.31
VTH1P40438 YLR280CYLR280C 351 nt13.09□□□□□ -0.31
VTH1P40438 PET18YCR020C 648 nt13.08□□□□□ -0.32
VTH1P40438 YMR210WYMR210W 1350 nt13.06□□□□□ -0.32
VTH1P40438 REX2YLR059C 810 nt13.05□□□□□ -0.32
VTH1P40438 ENO1YGR254W 1314 nt13.04□□□□□ -0.32
VTH1P40438 SAC7YDR389W 1965 nt13.03□□□□□ -0.32
VTH1P40438 ELO1YJL196C 933 nt13.02□□□□□ -0.33
VTH1P40438 YPL108WYPL108W 507 nt13.02□□□□□ -0.33
VTH1P40438 VPS62YGR141W 1404 nt13□□□□□ -0.33
VTH1P40438 LEU2YCL018W 1095 nt13□□□□□ -0.33
VTH1P40438 ELP4YPL101W 1371 nt12.99□□□□□ -0.33
VTH1P40438 BAP3YDR046C 1815 nt12.98□□□□□ -0.33
VTH1P40438 UTR5YEL035C 501 nt12.98□□□□□ -0.33
VTH1P40438 TOS1YBR162C 1368 nt12.98□□□□□ -0.33
VTH1P40438 SDH8YBR269C 417 nt12.96□□□□□ -0.33
VTH1P40438 PRE5YMR314W 705 nt12.94□□□□□ -0.34
VTH1P40438 VBA3YCL069W 1377 nt12.94□□□□□ -0.34
VTH1P40438 YPL247CYPL247C 1572 nt12.93□□□□□ -0.34
VTH1P40438 LSB6YJL100W 1824 nt12.93□□□□□ -0.34
VTH1P40438 MRP1YDR347W 966 nt12.92□□□□□ -0.34
VTH1P40438 ADA2YDR448W 1305 nt12.9□□□□□ -0.34
VTH1P40438 SWT21YNL187W 1074 nt12.88□□□□□ -0.35
VTH1P40438 YDL086WYDL086W 822 nt12.88□□□□□ -0.35
VTH1P40438 LSP1YPL004C 1026 nt12.83□□□□□ -0.36
VTH1P40438 YJR149WYJR149W 1215 nt12.82□□□□□ -0.36
VTH1P40438 SFL1YOR140W 2301 nt12.81□□□□□ -0.36
VTH1P40438 YLR046CYLR046C 813 nt12.8□□□□□ -0.36
VTH1P40438 YKL053WYKL053W 375 nt12.78□□□□□ -0.36
VTH1P40438 MET1YKR069W 1782 nt12.77□□□□□ -0.37
VTH1P40438 YMR166CYMR166C 1107 nt12.77□□□□□ -0.37
VTH1P40438 GDH1YOR375C 1365 nt12.76□□□□□ -0.37
VTH1P40438 YIL100C-AYIL100C-A 339 nt12.75□□□□□ -0.37
VTH1P40438 CCT2YIL142W 1584 nt12.74□□□□□ -0.37
VTH1P40438 SRP54YPR088C 1626 nt12.74□□□□□ -0.37
VTH1P40438 ADE1YAR015W 921 nt12.73□□□□□ -0.37
VTH1P40438 ENT4YLL038C 744 nt12.72□□□□□ -0.37
VTH1P40438 PBP1YGR178C 2169 nt12.71□□□□□ -0.38
Retrieved 100 of 7,029 protein–RNA pairs in 49.7 ms