Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 TPS1YBR126C 1488 nt7.83□□□□□ -1.16
SSH1P38353 RTG2YGL252C 1767 nt7.82□□□□□ -1.16
SSH1P38353 YLR046CYLR046C 813 nt7.82□□□□□ -1.16
SSH1P38353 RIB7YBR153W 735 nt7.82□□□□□ -1.16
SSH1P38353 MRS6YOR370C 1812 nt7.82□□□□□ -1.16
SSH1P38353 YKL133CYKL133C 1392 nt7.82□□□□□ -1.16
SSH1P38353 YHR219WYHR219W 1875 nt7.81□□□□□ -1.16
SSH1P38353 YRF1-2YER190W 5046 nt7.8□□□□□ -1.16
SSH1P38353 YDR455CYDR455C 309 nt7.8□□□□□ -1.16
SSH1P38353 DLD3YEL071W 1491 nt7.8□□□□□ -1.16
SSH1P38353 SSL2YIL143C 2532 nt7.8□□□□□ -1.16
SSH1P38353 GAL3YDR009W 1563 nt7.8□□□□□ -1.16
SSH1P38353 RIB2YOL066C 1776 nt7.79□□□□□ -1.16
SSH1P38353 ODC1YPL134C 933 nt7.79□□□□□ -1.16
SSH1P38353 LSM5YER146W 282 nt7.78□□□□□ -1.16
SSH1P38353 DUR3YHL016C 2208 nt7.78□□□□□ -1.16
SSH1P38353 GCD11YER025W 1584 nt7.77□□□□□ -1.17
SSH1P38353 TMA23YMR269W 636 nt7.77□□□□□ -1.17
SSH1P38353 DMA2YNL116W 1569 nt7.76□□□□□ -1.17
SSH1P38353 DDI1YER143W 1287 nt7.76□□□□□ -1.17
SSH1P38353 CWP2YKL096W-A 279 nt7.76□□□□□ -1.17
SSH1P38353 YNR029CYNR029C 1290 nt7.76□□□□□ -1.17
SSH1P38353 MDL2YPL270W 2322 nt7.76□□□□□ -1.17
SSH1P38353 ERG13YML126C 1476 nt7.75□□□□□ -1.17
SSH1P38353 RRT8YOL048C 1029 nt7.74□□□□□ -1.17
SSH1P38353 RPD3YNL330C 1302 nt7.74□□□□□ -1.17
SSH1P38353 IMO32YGR031W 1029 nt7.73□□□□□ -1.17
SSH1P38353 LSR1LSR1 1175 nt7.73□□□□□ -1.17
SSH1P38353 ADH1YOL086C 1047 nt7.73□□□□□ -1.17
SSH1P38353 ITR2YOL103W 1830 nt7.73□□□□□ -1.17
SSH1P38353 PSD1YNL169C 1503 nt7.73□□□□□ -1.17
SSH1P38353 SAC7YDR389W 1965 nt7.71□□□□□ -1.17
SSH1P38353 MDM35YKL053C-A 261 nt7.71□□□□□ -1.18
SSH1P38353 CYT1YOR065W 930 nt7.71□□□□□ -1.18
SSH1P38353 VMA11YPL234C 495 nt7.71□□□□□ -1.18
SSH1P38353 TIM44YIL022W 1296 nt7.68□□□□□ -1.18
SSH1P38353 ADE2YOR128C 1716 nt7.68□□□□□ -1.18
SSH1P38353 SNU66YOR308C 1764 nt7.68□□□□□ -1.18
SSH1P38353 GNP1YDR508C 1992 nt7.68□□□□□ -1.18
SSH1P38353 LPD1YFL018C 1500 nt7.68□□□□□ -1.18
SSH1P38353 DAK2YFL053W 1776 nt7.67□□□□□ -1.18
SSH1P38353 KRR1YCL059C 951 nt7.67□□□□□ -1.18
SSH1P38353 YOR072WYOR072W 315 nt7.67□□□□□ -1.18
SSH1P38353 TIP1YBR067C 633 nt7.67□□□□□ -1.18
SSH1P38353 YHR218WYHR218W 1812 nt7.66□□□□□ -1.18
SSH1P38353 ADE8YDR408C 645 nt7.65□□□□□ -1.18
SSH1P38353 ECM10YEL030W 1935 nt7.65□□□□□ -1.18
SSH1P38353 MAS1YLR163C 1389 nt7.65□□□□□ -1.18
SSH1P38353 YMR262WYMR262W 942 nt7.65□□□□□ -1.18
SSH1P38353 YJR114WYJR114W 393 nt7.64□□□□□ -1.19
SSH1P38353 YNR064CYNR064C 873 nt7.64□□□□□ -1.19
SSH1P38353 SNX3YOR357C 489 nt7.63□□□□□ -1.19
SSH1P38353 SNZ1YMR096W 894 nt7.62□□□□□ -1.19
SSH1P38353 RPC31YNL151C 756 nt7.62□□□□□ -1.19
SSH1P38353 YPR126CYPR126C 309 nt7.62□□□□□ -1.19
SSH1P38353 CCT5YJR064W 1689 nt7.62□□□□□ -1.19
SSH1P38353 ADE5,7YGL234W 2409 nt7.62□□□□□ -1.19
SSH1P38353 MAM3YOL060C 2121 nt7.61□□□□□ -1.19
SSH1P38353 YMR265CYMR265C 1386 nt7.6□□□□□ -1.19
SSH1P38353 HXT10YFL011W 1641 nt7.6□□□□□ -1.19
SSH1P38353 YFR036W-AYFR036W-A 651 nt7.6□□□□□ -1.19
SSH1P38353 YJL195CYJL195C 702 nt7.6□□□□□ -1.19
SSH1P38353 RIM2YBR192W 1134 nt7.6□□□□□ -1.19
SSH1P38353 TVP23YDR084C 600 nt7.59□□□□□ -1.19
SSH1P38353 PCP1YGR101W 1041 nt7.59□□□□□ -1.19
SSH1P38353 ELO1YJL196C 933 nt7.59□□□□□ -1.19
SSH1P38353 OPI3YJR073C 621 nt7.59□□□□□ -1.19
SSH1P38353 HAP5YOR358W 729 nt7.58□□□□□ -1.2
SSH1P38353 KEL3YPL263C 1956 nt7.58□□□□□ -1.2
SSH1P38353 DPL1YDR294C 1770 nt7.58□□□□□ -1.2
SSH1P38353 MEX67YPL169C 1800 nt7.57□□□□□ -1.2
SSH1P38353 RPN14YGL004C 1254 nt7.57□□□□□ -1.2
SSH1P38353 IML3YBR107C 738 nt7.57□□□□□ -1.2
SSH1P38353 SUV3YPL029W 2214 nt7.56□□□□□ -1.2
SSH1P38353 SPS100YHR139C 981 nt7.56□□□□□ -1.2
SSH1P38353 UFD1YGR048W 1086 nt7.55□□□□□ -1.2
SSH1P38353 CTI6YPL181W 1521 nt7.55□□□□□ -1.2
SSH1P38353 AGP3YFL055W 1677 nt7.54□□□□□ -1.2
SSH1P38353 FUN14YAL008W 597 nt7.53□□□□□ -1.2
SSH1P38353 snR31snR31 225 nt7.53□□□□□ -1.2
SSH1P38353 INH1YDL181W 258 nt7.52□□□□□ -1.21
SSH1P38353 YEL008WYEL008W 381 nt7.51□□□□□ -1.21
SSH1P38353 MHF1YOL086W-A 273 nt7.51□□□□□ -1.21
SSH1P38353 LEU4YNL104C 1860 nt7.5□□□□□ -1.21
SSH1P38353 SWT21YNL187W 1074 nt7.5□□□□□ -1.21
SSH1P38353 ABZ2YMR289W 1125 nt7.49□□□□□ -1.21
SSH1P38353 CRC1YOR100C 984 nt7.49□□□□□ -1.21
SSH1P38353 MET1YKR069W 1782 nt7.48□□□□□ -1.21
SSH1P38353 TAF13YML098W 504 nt7.47□□□□□ -1.21
SSH1P38353 AMF1YOR378W 1548 nt7.47□□□□□ -1.21
SSH1P38353 YDR467CYDR467C 327 nt7.45□□□□□ -1.22
SSH1P38353 NBA1YOL070C 1506 nt7.45□□□□□ -1.22
SSH1P38353 YEL023CYEL023C 2049 nt7.44□□□□□ -1.22
SSH1P38353 tE(CUC)DtE(CUC)D 72 nt7.44□□□□□ -1.22
SSH1P38353 tE(CUC)ItE(CUC)I 72 nt7.44□□□□□ -1.22
SSH1P38353 POT1YIL160C 1254 nt7.44□□□□□ -1.22
SSH1P38353 ENO2YHR174W 1314 nt7.44□□□□□ -1.22
SSH1P38353 YRF1-3YGR296W 5580 nt7.42□□□□□ -1.22
SSH1P38353 YRF1-6YNL339C 5580 nt7.42□□□□□ -1.22
SSH1P38353 YRF1-7YPL283C 5580 nt7.42□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 48.3 ms