Protein–RNA interactions for Protein: P34223

SHP1, UBX domain-containing protein 1, yeastyeast

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHP1P34223 RRT8YOL048C 1029 nt9.77□□□□□ -0.85
SHP1P34223 SWM1YDR260C 513 nt9.75□□□□□ -0.85
SHP1P34223 YER152W-AYER152W-A 567 nt9.74□□□□□ -0.85
SHP1P34223 POP2YNR052C 1302 nt9.74□□□□□ -0.85
SHP1P34223 KRE1YNL322C 942 nt9.73□□□□□ -0.85
SHP1P34223 YCR025CYCR025C 411 nt9.72□□□□□ -0.85
SHP1P34223 ADE8YDR408C 645 nt9.71□□□□□ -0.86
SHP1P34223 ERG13YML126C 1476 nt9.71□□□□□ -0.86
SHP1P34223 LYS20YDL182W 1287 nt9.7□□□□□ -0.86
SHP1P34223 TVP23YDR084C 600 nt9.7□□□□□ -0.86
SHP1P34223 ABZ2YMR289W 1125 nt9.7□□□□□ -0.86
SHP1P34223 THP3YPR045C 1413 nt9.7□□□□□ -0.86
SHP1P34223 CWC15YDR163W 528 nt9.69□□□□□ -0.86
SHP1P34223 FLX1YIL134W 936 nt9.69□□□□□ -0.86
SHP1P34223 PHB2YGR231C 933 nt9.67□□□□□ -0.86
SHP1P34223 ASP3-1YLR155C 1089 nt9.67□□□□□ -0.86
SHP1P34223 ASP3-2YLR157C 1089 nt9.67□□□□□ -0.86
SHP1P34223 ASP3-3YLR158C 1089 nt9.67□□□□□ -0.86
SHP1P34223 ASP3-4YLR160C 1089 nt9.67□□□□□ -0.86
SHP1P34223 OPI3YJR073C 621 nt9.66□□□□□ -0.86
SHP1P34223 ACO2YJL200C 2370 nt9.65□□□□□ -0.86
SHP1P34223 ADH3YMR083W 1128 nt9.65□□□□□ -0.86
SHP1P34223 SPE2YOL052C 1191 nt9.65□□□□□ -0.86
SHP1P34223 QDR2YIL121W 1629 nt9.63□□□□□ -0.87
SHP1P34223 CYT2YKL087C 675 nt9.62□□□□□ -0.87
SHP1P34223 SAC7YDR389W 1965 nt9.62□□□□□ -0.87
SHP1P34223 VPS62YGR141W 1404 nt9.61□□□□□ -0.87
SHP1P34223 BUD20YLR074C 501 nt9.59□□□□□ -0.87
SHP1P34223 FSH2YMR222C 672 nt9.58□□□□□ -0.88
SHP1P34223 SER2YGR208W 930 nt9.57□□□□□ -0.88
SHP1P34223 YDL086WYDL086W 822 nt9.55□□□□□ -0.88
SHP1P34223 TPC1YGR096W 945 nt9.55□□□□□ -0.88
SHP1P34223 AIM1YAL046C 357 nt9.55□□□□□ -0.88
SHP1P34223 NAR1YNL240C 1476 nt9.54□□□□□ -0.88
SHP1P34223 YAT1YAR035W 2064 nt9.54□□□□□ -0.88
SHP1P34223 MOB1YIL106W 945 nt9.53□□□□□ -0.88
SHP1P34223 YMR007WYMR007W 381 nt9.53□□□□□ -0.88
SHP1P34223 AMF1YOR378W 1548 nt9.52□□□□□ -0.88
SHP1P34223 CYC3YAL039C 810 nt9.51□□□□□ -0.89
SHP1P34223 ENO2YHR174W 1314 nt9.51□□□□□ -0.89
SHP1P34223 PCP1YGR101W 1041 nt9.5□□□□□ -0.89
SHP1P34223 BET2YPR176C 978 nt9.5□□□□□ -0.89
SHP1P34223 DIG1YPL049C 1359 nt9.49□□□□□ -0.89
SHP1P34223 YIL100C-AYIL100C-A 339 nt9.48□□□□□ -0.89
SHP1P34223 HTS1YPR033C 1641 nt9.48□□□□□ -0.89
SHP1P34223 YKR012CYKR012C 378 nt9.47□□□□□ -0.89
SHP1P34223 YNR064CYNR064C 873 nt9.47□□□□□ -0.89
SHP1P34223 PAU21YOR394W 495 nt9.47□□□□□ -0.89
SHP1P34223 PAU22YPL282C 495 nt9.47□□□□□ -0.89
SHP1P34223 YOR325WYOR325W 474 nt9.46□□□□□ -0.9
SHP1P34223 RPC82YPR190C 1965 nt9.46□□□□□ -0.9
SHP1P34223 LSB6YJL100W 1824 nt9.45□□□□□ -0.9
SHP1P34223 TGA1tA(UGC)A 73 nt9.45□□□□□ -0.9
SHP1P34223 tA(UGC)EtA(UGC)E 73 nt9.45□□□□□ -0.9
SHP1P34223 tA(UGC)GtA(UGC)G 73 nt9.45□□□□□ -0.9
SHP1P34223 tA(UGC)LtA(UGC)L 73 nt9.45□□□□□ -0.9
SHP1P34223 tA(UGC)OtA(UGC)O 73 nt9.45□□□□□ -0.9
SHP1P34223 SDS24YBR214W 1584 nt9.45□□□□□ -0.9
SHP1P34223 YOR343CYOR343C 327 nt9.44□□□□□ -0.9
SHP1P34223 NAM8YHR086W 1572 nt9.44□□□□□ -0.9
SHP1P34223 CCT2YIL142W 1584 nt9.44□□□□□ -0.9
SHP1P34223 SFL1YOR140W 2301 nt9.44□□□□□ -0.9
SHP1P34223 RCR1YBR005W 642 nt9.43□□□□□ -0.9
SHP1P34223 LEU2YCL018W 1095 nt9.43□□□□□ -0.9
SHP1P34223 YGR210CYGR210C 1236 nt9.42□□□□□ -0.9
SHP1P34223 SRP102YKL154W 735 nt9.42□□□□□ -0.9
SHP1P34223 ENT4YLL038C 744 nt9.42□□□□□ -0.9
SHP1P34223 INA1YLR413W 2028 nt9.41□□□□□ -0.9
SHP1P34223 SWT21YNL187W 1074 nt9.41□□□□□ -0.9
SHP1P34223 ERO1YML130C 1692 nt9.41□□□□□ -0.9
SHP1P34223 VBA3YCL069W 1377 nt9.4□□□□□ -0.9
SHP1P34223 ELO1YJL196C 933 nt9.4□□□□□ -0.9
SHP1P34223 OPI10YOL032W 741 nt9.39□□□□□ -0.91
SHP1P34223 ILV3YJR016C 1758 nt9.38□□□□□ -0.91
SHP1P34223 YLR280CYLR280C 351 nt9.37□□□□□ -0.91
SHP1P34223 FCY1YPR062W 477 nt9.37□□□□□ -0.91
SHP1P34223 ENO1YGR254W 1314 nt9.36□□□□□ -0.91
SHP1P34223 RPL12BYDR418W 498 nt9.36□□□□□ -0.91
SHP1P34223 GRH1YDR517W 1119 nt9.36□□□□□ -0.91
SHP1P34223 YLR046CYLR046C 813 nt9.36□□□□□ -0.91
SHP1P34223 ITR2YOL103W 1830 nt9.35□□□□□ -0.91
SHP1P34223 KEL3YPL263C 1956 nt9.35□□□□□ -0.91
SHP1P34223 SUV3YPL029W 2214 nt9.35□□□□□ -0.91
SHP1P34223 MET1YKR069W 1782 nt9.35□□□□□ -0.91
SHP1P34223 YJL160CYJL160C 864 nt9.34□□□□□ -0.91
SHP1P34223 REX2YLR059C 810 nt9.34□□□□□ -0.91
SHP1P34223 YAL016C-AYAL016C-A 315 nt9.33□□□□□ -0.92
SHP1P34223 HRA1HRA1 564 nt9.33□□□□□ -0.92
SHP1P34223 EMC3YKL207W 762 nt9.32□□□□□ -0.92
SHP1P34223 YPL108WYPL108W 507 nt9.32□□□□□ -0.92
SHP1P34223 YKL053WYKL053W 375 nt9.31□□□□□ -0.92
SHP1P34223 DLD3YEL071W 1491 nt9.3□□□□□ -0.92
SHP1P34223 YMR210WYMR210W 1350 nt9.26□□□□□ -0.93
SHP1P34223 SRP54YPR088C 1626 nt9.26□□□□□ -0.93
SHP1P34223 YFR020WYFR020W 699 nt9.25□□□□□ -0.93
SHP1P34223 CRC1YOR100C 984 nt9.25□□□□□ -0.93
SHP1P34223 YMR265CYMR265C 1386 nt9.24□□□□□ -0.93
SHP1P34223 YOR268CYOR268C 399 nt9.24□□□□□ -0.93
SHP1P34223 HAP5YOR358W 729 nt9.24□□□□□ -0.93
SHP1P34223 ARO8YGL202W 1503 nt9.24□□□□□ -0.93
Retrieved 100 of 7,029 protein–RNA pairs in 83.3 ms