Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 RAS2YNL098C 969 nt8.15□□□□□ -1.1
PUB1P32588 ACO2YJL200C 2370 nt8.15□□□□□ -1.1
PUB1P32588 MRS6YOR370C 1812 nt8.15□□□□□ -1.11
PUB1P32588 DMA2YNL116W 1569 nt8.14□□□□□ -1.11 RIP-Chip
PUB1P32588 YAL016C-BYAL016C-B 186 nt8.14□□□□□ -1.11
PUB1P32588 AIM1YAL046C 357 nt8.14□□□□□ -1.11 RIP-Chip
PUB1P32588 CYT1YOR065W 930 nt8.14□□□□□ -1.11 RIP-Chip
PUB1P32588 ODC1YPL134C 933 nt8.14□□□□□ -1.11 RIP-Chip
PUB1P32588 GND1YHR183W 1470 nt8.13□□□□□ -1.11
PUB1P32588 FTH1YBR207W 1398 nt8.13□□□□□ -1.11 RIP-Chip
PUB1P32588 LSB5YCL034W 1065 nt8.13□□□□□ -1.11
PUB1P32588 RSM23YGL129C 1353 nt8.12□□□□□ -1.11
PUB1P32588 RAD51YER095W 1203 nt8.12□□□□□ -1.11 RIP-Chip
PUB1P32588 COG1YGL223C 1254 nt8.12□□□□□ -1.11 RIP-Chip
PUB1P32588 PAB1YER165W 1734 nt8.12□□□□□ -1.11 RIP-Chip
PUB1P32588 SMM1YNR015W 1155 nt8.11□□□□□ -1.11
PUB1P32588 SSL2YIL143C 2532 nt8.11□□□□□ -1.11
PUB1P32588 TAT2YOL020W 1779 nt8.1□□□□□ -1.11 RIP-Chip
PUB1P32588 SOL2YCR073W-A 948 nt8.1□□□□□ -1.11
PUB1P32588 ENT4YLL038C 744 nt8.1□□□□□ -1.11
PUB1P32588 YLR046CYLR046C 813 nt8.1□□□□□ -1.11 RIP-Chip
PUB1P32588 ASP3-1YLR155C 1089 nt8.1□□□□□ -1.11 RIP-Chip
PUB1P32588 ASP3-2YLR157C 1089 nt8.1□□□□□ -1.11 RIP-Chip
PUB1P32588 ASP3-3YLR158C 1089 nt8.1□□□□□ -1.11 RIP-Chip
PUB1P32588 ASP3-4YLR160C 1089 nt8.1□□□□□ -1.11 RIP-Chip
PUB1P32588 MOD5YOR274W 1287 nt8.1□□□□□ -1.11
PUB1P32588 YHR219WYHR219W 1875 nt8.09□□□□□ -1.11
PUB1P32588 RPM1RPM1 483 nt8.09□□□□□ -1.11
PUB1P32588 GPN2YOR262W 1044 nt8.09□□□□□ -1.11
PUB1P32588 RIB3YDR487C 627 nt8.08□□□□□ -1.12
PUB1P32588 DLD3YEL071W 1491 nt8.06□□□□□ -1.12 RIP-Chip
PUB1P32588 RPT5YOR117W 1305 nt8.06□□□□□ -1.12
PUB1P32588 YHP1YDR451C 1062 nt8.06□□□□□ -1.12 RIP-Chip
PUB1P32588 BNS1YGR230W 414 nt8.06□□□□□ -1.12
PUB1P32588 OYE2YHR179W 1203 nt8.06□□□□□ -1.12
PUB1P32588 AST1YBL069W 1290 nt8.06□□□□□ -1.12
PUB1P32588 SAM3YPL274W 1764 nt8.05□□□□□ -1.12 RIP-Chip
PUB1P32588 LOT5YKL183W 921 nt8.05□□□□□ -1.12
PUB1P32588 YTH1YPR107C 627 nt8.05□□□□□ -1.12
PUB1P32588 CWP2YKL096W-A 279 nt8.04□□□□□ -1.12
PUB1P32588 YLR036CYLR036C 612 nt8.04□□□□□ -1.12 RIP-Chip
PUB1P32588 YMR306C-AYMR306C-A 390 nt8.04□□□□□ -1.12
PUB1P32588 LSR1LSR1 1175 nt8.04□□□□□ -1.12
PUB1P32588 EAF3YPR023C 1206 nt8.04□□□□□ -1.12
PUB1P32588 RPD3YNL330C 1302 nt8.03□□□□□ -1.12
PUB1P32588 PIC2YER053C 903 nt8.03□□□□□ -1.12 RIP-Chip
PUB1P32588 MDM35YKL053C-A 261 nt8.03□□□□□ -1.12
PUB1P32588 YML079WYML079W 606 nt8.03□□□□□ -1.12
PUB1P32588 YHR218WYHR218W 1812 nt8.03□□□□□ -1.12
PUB1P32588 LSM5YER146W 282 nt8.02□□□□□ -1.13
PUB1P32588 TIM44YIL022W 1296 nt8.02□□□□□ -1.13
PUB1P32588 YDR455CYDR455C 309 nt8.01□□□□□ -1.13
PUB1P32588 PEX27YOR193W 1131 nt8.01□□□□□ -1.13
PUB1P32588 YHL008CYHL008C 1884 nt8□□□□□ -1.13 RIP-Chip
PUB1P32588 LSB3YFR024C-A 1380 nt8□□□□□ -1.13
PUB1P32588 PHO92YDR374C 921 nt8□□□□□ -1.13
PUB1P32588 tR(UCU)Q1tR(UCU)Q1 73 nt8□□□□□ -1.13
PUB1P32588 TPS1YBR126C 1488 nt8□□□□□ -1.13
PUB1P32588 ITR2YOL103W 1830 nt7.99□□□□□ -1.13 RIP-Chip
PUB1P32588 YGL118CYGL118C 438 nt7.99□□□□□ -1.13
PUB1P32588 YJL055WYJL055W 738 nt7.99□□□□□ -1.13
PUB1P32588 UBC12YLR306W 567 nt7.99□□□□□ -1.13
PUB1P32588 YLR349WYLR349W 507 nt7.99□□□□□ -1.13
PUB1P32588 YBL081WYBL081W 1107 nt7.99□□□□□ -1.13 RIP-Chip
PUB1P32588 STE4YOR212W 1272 nt7.99□□□□□ -1.13
PUB1P32588 TIP1YBR067C 633 nt7.99□□□□□ -1.13 RIP-Chip
PUB1P32588 VRG4YGL225W 1014 nt7.98□□□□□ -1.13 RIP-Chip
PUB1P32588 ARC19YKL013C 516 nt7.98□□□□□ -1.13
PUB1P32588 YNR029CYNR029C 1290 nt7.98□□□□□ -1.13
PUB1P32588 VMA11YPL234C 495 nt7.98□□□□□ -1.13 RIP-Chip
PUB1P32588 HXT10YFL011W 1641 nt7.97□□□□□ -1.13
PUB1P32588 MPC1YGL080W 393 nt7.97□□□□□ -1.13 RIP-Chip
PUB1P32588 FUN14YAL008W 597 nt7.97□□□□□ -1.13
PUB1P32588 REC114YMR133W 1287 nt7.97□□□□□ -1.13
PUB1P32588 ADH1YOL086C 1047 nt7.97□□□□□ -1.13
PUB1P32588 ERG13YML126C 1476 nt7.97□□□□□ -1.13 RIP-Chip
PUB1P32588 DDI1YER143W 1287 nt7.96□□□□□ -1.14
PUB1P32588 YHL044WYHL044W 708 nt7.96□□□□□ -1.14
PUB1P32588 YJL195CYJL195C 702 nt7.96□□□□□ -1.14
PUB1P32588 MRPL36YBR122C 534 nt7.96□□□□□ -1.14
PUB1P32588 RIB7YBR153W 735 nt7.96□□□□□ -1.14 RIP-Chip
PUB1P32588 HXT12YIL170W 1374 nt7.96□□□□□ -1.14
PUB1P32588 YRF1-2YER190W 5046 nt7.95□□□□□ -1.14
PUB1P32588 YMR262WYMR262W 942 nt7.95□□□□□ -1.14
PUB1P32588 BNA3YJL060W 1335 nt7.95□□□□□ -1.14 RIP-Chip
PUB1P32588 MET2YNL277W 1461 nt7.94□□□□□ -1.14
PUB1P32588 AIM41YOR215C 558 nt7.94□□□□□ -1.14
PUB1P32588 TMA23YMR269W 636 nt7.92□□□□□ -1.14
PUB1P32588 SNX3YOR357C 489 nt7.92□□□□□ -1.14
PUB1P32588 YPI1YFR003C 468 nt7.91□□□□□ -1.14
PUB1P32588 RPC31YNL151C 756 nt7.91□□□□□ -1.14
PUB1P32588 NAT5YOR253W 531 nt7.91□□□□□ -1.14 RIP-Chip
PUB1P32588 HOS2YGL194C 1359 nt7.91□□□□□ -1.14 RIP-Chip
PUB1P32588 GAL3YDR009W 1563 nt7.91□□□□□ -1.14
PUB1P32588 SAC7YDR389W 1965 nt7.91□□□□□ -1.14 RIP-Chip
PUB1P32588 KRR1YCL059C 951 nt7.9□□□□□ -1.14
PUB1P32588 ADH7YCR105W 1086 nt7.9□□□□□ -1.14
PUB1P32588 PAU15YIR041W 375 nt7.89□□□□□ -1.15
PUB1P32588 RRT8YOL048C 1029 nt7.89□□□□□ -1.15 RIP-Chip
PUB1P32588 AGP3YFL055W 1677 nt7.89□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 25.3 ms