Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 RPC31YNL151C 756 nt9.38□□□□□ -0.91
MSH1P25846 MIM1YOL026C 342 nt9.38□□□□□ -0.91
MSH1P25846 YDR455CYDR455C 309 nt9.37□□□□□ -0.91
MSH1P25846 MSB4YOL112W 1479 nt9.36□□□□□ -0.91
MSH1P25846 YDR510C-AYDR510C-A 117 nt9.35□□□□□ -0.91
MSH1P25846 ENT4YLL038C 744 nt9.34□□□□□ -0.91
MSH1P25846 ASP3-1YLR155C 1089 nt9.34□□□□□ -0.91
MSH1P25846 ASP3-2YLR157C 1089 nt9.34□□□□□ -0.91
MSH1P25846 ASP3-3YLR158C 1089 nt9.34□□□□□ -0.91
MSH1P25846 ASP3-4YLR160C 1089 nt9.34□□□□□ -0.91
MSH1P25846 RAS2YNL098C 969 nt9.34□□□□□ -0.91
MSH1P25846 VMA11YPL234C 495 nt9.34□□□□□ -0.91
MSH1P25846 NPP2YEL016C 1482 nt9.34□□□□□ -0.91
MSH1P25846 LSM5YER146W 282 nt9.33□□□□□ -0.92
MSH1P25846 SNX3YOR357C 489 nt9.33□□□□□ -0.92
MSH1P25846 DAK2YFL053W 1776 nt9.3□□□□□ -0.92
MSH1P25846 GND1YHR183W 1470 nt9.3□□□□□ -0.92
MSH1P25846 GTB1YDR221W 2109 nt9.3□□□□□ -0.92
MSH1P25846 GPN2YOR262W 1044 nt9.3□□□□□ -0.92
MSH1P25846 Q0010Q0010 387 nt9.3□□□□□ -0.92
MSH1P25846 LSB5YCL034W 1065 nt9.3□□□□□ -0.92
MSH1P25846 INH1YDL181W 258 nt9.29□□□□□ -0.92
MSH1P25846 YPI1YFR003C 468 nt9.28□□□□□ -0.92
MSH1P25846 UFD1YGR048W 1086 nt9.28□□□□□ -0.92
MSH1P25846 CAB5YDR196C 726 nt9.27□□□□□ -0.93
MSH1P25846 ESBP6YNL125C 2022 nt9.27□□□□□ -0.93
MSH1P25846 APT2YDR441C 546 nt9.26□□□□□ -0.93
MSH1P25846 LOT5YKL183W 921 nt9.26□□□□□ -0.93
MSH1P25846 HBS1YKR084C 1836 nt9.26□□□□□ -0.93
MSH1P25846 TRP2YER090W 1524 nt9.26□□□□□ -0.93
MSH1P25846 CSM1YCR086W 573 nt9.25□□□□□ -0.93
MSH1P25846 DUR3YHL016C 2208 nt9.24□□□□□ -0.93
MSH1P25846 ERG13YML126C 1476 nt9.23□□□□□ -0.93
MSH1P25846 DUS3YLR401C 2007 nt9.23□□□□□ -0.93
MSH1P25846 SAC7YDR389W 1965 nt9.23□□□□□ -0.93
MSH1P25846 FIT1YDR534C 1587 nt9.22□□□□□ -0.93
MSH1P25846 YDR467CYDR467C 327 nt9.22□□□□□ -0.93
MSH1P25846 NUC1YJL208C 990 nt9.22□□□□□ -0.93
MSH1P25846 FCY21YER060W 1587 nt9.21□□□□□ -0.93
MSH1P25846 ELO1YJL196C 933 nt9.2□□□□□ -0.94
MSH1P25846 YJL195CYJL195C 702 nt9.19□□□□□ -0.94
MSH1P25846 YJR154WYJR154W 1041 nt9.19□□□□□ -0.94
MSH1P25846 SMM1YNR015W 1155 nt9.19□□□□□ -0.94
MSH1P25846 EAF3YPR023C 1206 nt9.19□□□□□ -0.94
MSH1P25846 snR4snR4 186 nt9.19□□□□□ -0.94
MSH1P25846 tE(CUC)DtE(CUC)D 72 nt9.18□□□□□ -0.94
MSH1P25846 tE(CUC)ItE(CUC)I 72 nt9.18□□□□□ -0.94
MSH1P25846 FUN14YAL008W 597 nt9.18□□□□□ -0.94
MSH1P25846 ADH1YOL086C 1047 nt9.18□□□□□ -0.94
MSH1P25846 THI6YPL214C 1623 nt9.18□□□□□ -0.94
MSH1P25846 SAM3YPL274W 1764 nt9.18□□□□□ -0.94
MSH1P25846 DDI1YER143W 1287 nt9.17□□□□□ -0.94
MSH1P25846 SRM1YGL097W 1449 nt9.16□□□□□ -0.94
MSH1P25846 HXT11YOL156W 1704 nt9.16□□□□□ -0.94
MSH1P25846 LSB3YFR024C-A 1380 nt9.15□□□□□ -0.94
MSH1P25846 MAS1YLR163C 1389 nt9.14□□□□□ -0.95
MSH1P25846 KRR1YCL059C 951 nt9.14□□□□□ -0.95
MSH1P25846 OYE2YHR179W 1203 nt9.14□□□□□ -0.95
MSH1P25846 ORT1YOR130C 879 nt9.14□□□□□ -0.95
MSH1P25846 STE4YOR212W 1272 nt9.14□□□□□ -0.95
MSH1P25846 PRY1YJL079C 900 nt9.13□□□□□ -0.95
MSH1P25846 EMC3YKL207W 762 nt9.13□□□□□ -0.95
MSH1P25846 TPS1YBR126C 1488 nt9.13□□□□□ -0.95
MSH1P25846 YNR029CYNR029C 1290 nt9.12□□□□□ -0.95
MSH1P25846 FTH1YBR207W 1398 nt9.12□□□□□ -0.95
MSH1P25846 MET8YBR213W 825 nt9.11□□□□□ -0.95
MSH1P25846 YMR265CYMR265C 1386 nt9.11□□□□□ -0.95
MSH1P25846 LPD1YFL018C 1500 nt9.1□□□□□ -0.95
MSH1P25846 POP2YNR052C 1302 nt9.1□□□□□ -0.95
MSH1P25846 AAT1YKL106W 1356 nt9.09□□□□□ -0.95
MSH1P25846 SUV3YPL029W 2214 nt9.08□□□□□ -0.96
MSH1P25846 DTR1YBR180W 1719 nt9.08□□□□□ -0.96
MSH1P25846 RFC1YOR217W 2586 nt9.08□□□□□ -0.96
MSH1P25846 RPT5YOR117W 1305 nt9.07□□□□□ -0.96
MSH1P25846 YEL008WYEL008W 381 nt9.07□□□□□ -0.96
MSH1P25846 VRG4YGL225W 1014 nt9.07□□□□□ -0.96
MSH1P25846 GAL2YLR081W 1725 nt9.07□□□□□ -0.96
MSH1P25846 HXT12YIL170W 1374 nt9.06□□□□□ -0.96
MSH1P25846 HEM14YER014W 1620 nt9.05□□□□□ -0.96
MSH1P25846 HAP5YOR358W 729 nt9.05□□□□□ -0.96
MSH1P25846 ILV2YMR108W 2064 nt9.04□□□□□ -0.96
MSH1P25846 GPM1YKL152C 744 nt9.04□□□□□ -0.96
MSH1P25846 YLR349WYLR349W 507 nt9.04□□□□□ -0.96
MSH1P25846 RIB2YOL066C 1776 nt9.04□□□□□ -0.96
MSH1P25846 TMA23YMR269W 636 nt9.03□□□□□ -0.96
MSH1P25846 YBL095WYBL095W 813 nt9.03□□□□□ -0.96
MSH1P25846 MCM5YLR274W 2328 nt9.03□□□□□ -0.96
MSH1P25846 ADE16YLR028C 1776 nt9.02□□□□□ -0.97
MSH1P25846 YJL118WYJL118W 660 nt9.02□□□□□ -0.97
MSH1P25846 YNR064CYNR064C 873 nt9.02□□□□□ -0.97
MSH1P25846 ADH7YCR105W 1086 nt9.01□□□□□ -0.97
MSH1P25846 YJL055WYJL055W 738 nt9.01□□□□□ -0.97
MSH1P25846 YMC2YBR104W 990 nt9.01□□□□□ -0.97
MSH1P25846 CRC1YOR100C 984 nt9□□□□□ -0.97
MSH1P25846 HSV2YGR223C 1347 nt8.99□□□□□ -0.97
MSH1P25846 SFL1YOR140W 2301 nt8.98□□□□□ -0.97
MSH1P25846 RAD51YER095W 1203 nt8.97□□□□□ -0.97
MSH1P25846 RPN14YGL004C 1254 nt8.97□□□□□ -0.97
MSH1P25846 CPD1YGR247W 720 nt8.97□□□□□ -0.97
MSH1P25846 PAU15YIR041W 375 nt8.97□□□□□ -0.97
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms