Protein–RNA interactions for Protein: P14780

MMP9, Matrix metalloproteinase-9, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9P14780 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MMP9P14780 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
MMP9P14780 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
MMP9P14780 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.98■■□□□ 1.11
MMP9P14780 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MMP9P14780 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MMP9P14780 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
MMP9P14780 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
MMP9P14780 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
MMP9P14780 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
MMP9P14780 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.96■■□□□ 1.11
MMP9P14780 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.96■■□□□ 1.11
MMP9P14780 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MMP9P14780 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MMP9P14780 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
MMP9P14780 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MMP9P14780 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
MMP9P14780 AC044849.2-201ENST00000606596 710 ntBASIC21.95■■□□□ 1.1
MMP9P14780 AC139426.1-201ENST00000568218 2529 ntBASIC21.95■■□□□ 1.1
MMP9P14780 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
MMP9P14780 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MMP9P14780 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.93■■□□□ 1.1
MMP9P14780 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
MMP9P14780 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
MMP9P14780 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
MMP9P14780 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MMP9P14780 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MMP9P14780 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
MMP9P14780 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MMP9P14780 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MMP9P14780 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MMP9P14780 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MMP9P14780 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP9P14780 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MMP9P14780 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MMP9P14780 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MMP9P14780 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MMP9P14780 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MMP9P14780 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.88■■□□□ 1.09
MMP9P14780 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MMP9P14780 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MMP9P14780 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MMP9P14780 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MMP9P14780 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.87■■□□□ 1.09
MMP9P14780 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.87■■□□□ 1.09
MMP9P14780 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.87■■□□□ 1.09
MMP9P14780 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MMP9P14780 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
MMP9P14780 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.86■■□□□ 1.09
MMP9P14780 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
MMP9P14780 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.86■■□□□ 1.09
MMP9P14780 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.86■■□□□ 1.09
MMP9P14780 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MMP9P14780 ST7-AS1-201ENST00000456775 1889 ntBASIC21.86■■□□□ 1.09
MMP9P14780 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.85■■□□□ 1.09
MMP9P14780 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MMP9P14780 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MMP9P14780 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
MMP9P14780 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.84■■□□□ 1.09
MMP9P14780 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MMP9P14780 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
MMP9P14780 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
MMP9P14780 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.83■■□□□ 1.09
MMP9P14780 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.83■■□□□ 1.08
MMP9P14780 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.83■■□□□ 1.08
MMP9P14780 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MMP9P14780 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
MMP9P14780 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.81■■□□□ 1.08
MMP9P14780 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MMP9P14780 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MMP9P14780 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MMP9P14780 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MMP9P14780 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.8■■□□□ 1.08
MMP9P14780 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MMP9P14780 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.8■■□□□ 1.08
MMP9P14780 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
MMP9P14780 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MMP9P14780 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MMP9P14780 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MMP9P14780 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MMP9P14780 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MMP9P14780 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MMP9P14780 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MMP9P14780 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MMP9P14780 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MMP9P14780 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
MMP9P14780 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MMP9P14780 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MMP9P14780 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.76■■□□□ 1.07
MMP9P14780 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MMP9P14780 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MMP9P14780 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MMP9P14780 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MMP9P14780 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MMP9P14780 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP9P14780 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.74■■□□□ 1.07
MMP9P14780 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP9P14780 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.73■■□□□ 1.07
MMP9P14780 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP9P14780 ABHD17AP4-201ENST00000411545 909 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms