Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 DUX4L10-201ENST00000622460 1267 ntBASIC23.62■■□□□ 1.37
CCL21O00585 DUX4L25-201ENST00000624915 1269 ntBASIC23.62■■□□□ 1.37
CCL21O00585 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.61■■□□□ 1.37
CCL21O00585 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.6■■□□□ 1.37
CCL21O00585 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCL21O00585 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCL21O00585 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.59■■□□□ 1.37
CCL21O00585 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCL21O00585 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCL21O00585 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCL21O00585 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCL21O00585 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.58■■□□□ 1.37
CCL21O00585 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.58■■□□□ 1.36
CCL21O00585 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCL21O00585 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.57■■□□□ 1.36
CCL21O00585 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.56■■□□□ 1.36
CCL21O00585 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.56■■□□□ 1.36
CCL21O00585 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCL21O00585 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.54■■□□□ 1.36
CCL21O00585 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CCL21O00585 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCL21O00585 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.53■■□□□ 1.36
CCL21O00585 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCL21O00585 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCL21O00585 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCL21O00585 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCL21O00585 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCL21O00585 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCL21O00585 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CCL21O00585 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCL21O00585 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.5■■□□□ 1.35
CCL21O00585 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.49■■□□□ 1.35
CCL21O00585 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
CCL21O00585 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCL21O00585 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCL21O00585 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCL21O00585 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCL21O00585 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCL21O00585 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
CCL21O00585 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.46■■□□□ 1.35
CCL21O00585 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.46■■□□□ 1.35
CCL21O00585 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
CCL21O00585 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.45■■□□□ 1.34
CCL21O00585 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CCL21O00585 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
CCL21O00585 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CCL21O00585 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CCL21O00585 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CCL21O00585 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CCL21O00585 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CCL21O00585 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCL21O00585 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCL21O00585 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCL21O00585 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCL21O00585 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CCL21O00585 AC120057.4-201ENST00000624722 1615 ntBASIC23.44■■□□□ 1.34
CCL21O00585 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CCL21O00585 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
CCL21O00585 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.42■■□□□ 1.34
CCL21O00585 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.41■■□□□ 1.34
CCL21O00585 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCL21O00585 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.4■■□□□ 1.34
CCL21O00585 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCL21O00585 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
CCL21O00585 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.39■■□□□ 1.33
CCL21O00585 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.39■■□□□ 1.33
CCL21O00585 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCL21O00585 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCL21O00585 RARRES2P2-201ENST00000394842 485 ntBASIC23.37■■□□□ 1.33
CCL21O00585 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCL21O00585 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.36■■□□□ 1.33
CCL21O00585 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCL21O00585 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.35■■□□□ 1.33
CCL21O00585 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.35■■□□□ 1.33
CCL21O00585 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.35■■□□□ 1.33
CCL21O00585 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCL21O00585 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.34■■□□□ 1.33
CCL21O00585 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.34■■□□□ 1.33
CCL21O00585 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.34■■□□□ 1.33
CCL21O00585 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CCL21O00585 GPX1-201ENST00000419349 1106 ntBASIC23.33■■□□□ 1.33
CCL21O00585 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CCL21O00585 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.33■■□□□ 1.32
CCL21O00585 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CCL21O00585 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCL21O00585 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CCL21O00585 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCL21O00585 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCL21O00585 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CCL21O00585 ABHD17AP5-201ENST00000580133 923 ntBASIC23.32■■□□□ 1.32
CCL21O00585 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
CCL21O00585 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.32■■□□□ 1.32
CCL21O00585 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CCL21O00585 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.32■■□□□ 1.32
CCL21O00585 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CCL21O00585 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCL21O00585 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
CCL21O00585 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCL21O00585 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.3■■□□□ 1.32
CCL21O00585 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms