Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FAM90A9PA6NNJ1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FAM90A9PA6NNJ1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
FAM90A9PA6NNJ1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FAM90A9PA6NNJ1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FAM90A9PA6NNJ1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FAM90A9PA6NNJ1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
FAM90A9PA6NNJ1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.46■■□□□ 1.03
FAM90A9PA6NNJ1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
FAM90A9PA6NNJ1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FAM90A9PA6NNJ1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.45■■□□□ 1.02
FAM90A9PA6NNJ1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.45■■□□□ 1.02
FAM90A9PA6NNJ1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
FAM90A9PA6NNJ1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM90A9PA6NNJ1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FAM90A9PA6NNJ1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FAM90A9PA6NNJ1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM90A9PA6NNJ1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
FAM90A9PA6NNJ1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FAM90A9PA6NNJ1 AP006261.1-201ENST00000584783 668 ntBASIC21.42■■□□□ 1.02
FAM90A9PA6NNJ1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FAM90A9PA6NNJ1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
FAM90A9PA6NNJ1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
FAM90A9PA6NNJ1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FAM90A9PA6NNJ1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
FAM90A9PA6NNJ1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FAM90A9PA6NNJ1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
FAM90A9PA6NNJ1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.39■■□□□ 1.02
FAM90A9PA6NNJ1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.39■■□□□ 1.01
FAM90A9PA6NNJ1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
FAM90A9PA6NNJ1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FAM90A9PA6NNJ1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FAM90A9PA6NNJ1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.38■■□□□ 1.01
FAM90A9PA6NNJ1 AC005559.1-201ENST00000589661 871 ntBASIC21.38■■□□□ 1.01
FAM90A9PA6NNJ1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FAM90A9PA6NNJ1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FAM90A9PA6NNJ1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.37■■□□□ 1.01
FAM90A9PA6NNJ1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.37■■□□□ 1.01
FAM90A9PA6NNJ1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.37■■□□□ 1.01
FAM90A9PA6NNJ1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.36■■□□□ 1.01
FAM90A9PA6NNJ1 MIR3665-201ENST00000578708 105 ntBASIC21.36■■□□□ 1.01
FAM90A9PA6NNJ1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.36■■□□□ 1.01
FAM90A9PA6NNJ1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FAM90A9PA6NNJ1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FAM90A9PA6NNJ1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FAM90A9PA6NNJ1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
FAM90A9PA6NNJ1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
FAM90A9PA6NNJ1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
FAM90A9PA6NNJ1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
FAM90A9PA6NNJ1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.34■■□□□ 1.01
FAM90A9PA6NNJ1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FAM90A9PA6NNJ1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FAM90A9PA6NNJ1 DUX4L28-201ENST00000623687 678 ntBASIC21.33■■□□□ 1.01
FAM90A9PA6NNJ1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
FAM90A9PA6NNJ1 AL162393.1-201ENST00000437852 946 ntBASIC21.32■■□□□ 1
FAM90A9PA6NNJ1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FAM90A9PA6NNJ1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FAM90A9PA6NNJ1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FAM90A9PA6NNJ1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
FAM90A9PA6NNJ1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.3■■□□□ 1
FAM90A9PA6NNJ1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.3■■□□□ 1
FAM90A9PA6NNJ1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FAM90A9PA6NNJ1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.29■■□□□ 1
FAM90A9PA6NNJ1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FAM90A9PA6NNJ1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FAM90A9PA6NNJ1 AC142086.6-201ENST00000621154 1765 ntBASIC21.29■■□□□ 1
FAM90A9PA6NNJ1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FAM90A9PA6NNJ1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FAM90A9PA6NNJ1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.28■■□□□ 1
FAM90A9PA6NNJ1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FAM90A9PA6NNJ1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
FAM90A9PA6NNJ1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
FAM90A9PA6NNJ1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.28■■□□□ 1
FAM90A9PA6NNJ1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.27■■□□□ 1
FAM90A9PA6NNJ1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FAM90A9PA6NNJ1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FAM90A9PA6NNJ1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FAM90A9PA6NNJ1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FAM90A9PA6NNJ1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.26■□□□□ 0.99
FAM90A9PA6NNJ1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FAM90A9PA6NNJ1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
FAM90A9PA6NNJ1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
FAM90A9PA6NNJ1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.24■□□□□ 0.99
FAM90A9PA6NNJ1 AC087741.3-201ENST00000624270 1347 ntBASIC21.24■□□□□ 0.99
FAM90A9PA6NNJ1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FAM90A9PA6NNJ1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FAM90A9PA6NNJ1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FAM90A9PA6NNJ1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FAM90A9PA6NNJ1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.23■□□□□ 0.99
FAM90A9PA6NNJ1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.22■□□□□ 0.99
FAM90A9PA6NNJ1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FAM90A9PA6NNJ1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.22■□□□□ 0.99
FAM90A9PA6NNJ1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
FAM90A9PA6NNJ1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FAM90A9PA6NNJ1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FAM90A9PA6NNJ1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FAM90A9PA6NNJ1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.21■□□□□ 0.99
FAM90A9PA6NNJ1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.21■□□□□ 0.99
FAM90A9PA6NNJ1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
FAM90A9PA6NNJ1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms